Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tubb3Q9ERD7 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tubb3Q9ERD7 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Tubb3Q9ERD7 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tubb3Q9ERD7 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Tubb3Q9ERD7 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.14■□□□□ 0.97
Tubb3Q9ERD7 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tubb3Q9ERD7 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tubb3Q9ERD7 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tubb3Q9ERD7 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tubb3Q9ERD7 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Tubb3Q9ERD7 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tubb3Q9ERD7 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tubb3Q9ERD7 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tubb3Q9ERD7 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Tubb3Q9ERD7 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tubb3Q9ERD7 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
Tubb3Q9ERD7 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tubb3Q9ERD7 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Tubb3Q9ERD7 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.12■□□□□ 0.97
Tubb3Q9ERD7 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Tubb3Q9ERD7 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Tubb3Q9ERD7 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tubb3Q9ERD7 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tubb3Q9ERD7 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tubb3Q9ERD7 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tubb3Q9ERD7 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tubb3Q9ERD7 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tubb3Q9ERD7 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tubb3Q9ERD7 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Tubb3Q9ERD7 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tubb3Q9ERD7 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tubb3Q9ERD7 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Tubb3Q9ERD7 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.09■□□□□ 0.97
Tubb3Q9ERD7 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tubb3Q9ERD7 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Tubb3Q9ERD7 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.09■□□□□ 0.97
Tubb3Q9ERD7 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Tubb3Q9ERD7 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tubb3Q9ERD7 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.09■□□□□ 0.97
Tubb3Q9ERD7 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.08■□□□□ 0.97
Tubb3Q9ERD7 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tubb3Q9ERD7 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tubb3Q9ERD7 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.08■□□□□ 0.97
Tubb3Q9ERD7 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.08■□□□□ 0.97
Tubb3Q9ERD7 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tubb3Q9ERD7 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.08■□□□□ 0.97
Tubb3Q9ERD7 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tubb3Q9ERD7 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.07■□□□□ 0.96
Tubb3Q9ERD7 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Tubb3Q9ERD7 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tubb3Q9ERD7 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tubb3Q9ERD7 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tubb3Q9ERD7 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tubb3Q9ERD7 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tubb3Q9ERD7 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tubb3Q9ERD7 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tubb3Q9ERD7 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
Tubb3Q9ERD7 Notumos-201ENSMUST00000151998 2659 ntBASIC21.05■□□□□ 0.96
Tubb3Q9ERD7 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tubb3Q9ERD7 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tubb3Q9ERD7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
Tubb3Q9ERD7 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.04■□□□□ 0.96
Tubb3Q9ERD7 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tubb3Q9ERD7 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.04■□□□□ 0.96
Tubb3Q9ERD7 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Tubb3Q9ERD7 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tubb3Q9ERD7 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Tubb3Q9ERD7 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tubb3Q9ERD7 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Tubb3Q9ERD7 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tubb3Q9ERD7 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tubb3Q9ERD7 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Tubb3Q9ERD7 Gm5812-201ENSMUST00000061073 957 ntBASIC21.03■□□□□ 0.96
Tubb3Q9ERD7 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Tubb3Q9ERD7 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.03■□□□□ 0.96
Tubb3Q9ERD7 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tubb3Q9ERD7 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tubb3Q9ERD7 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Tubb3Q9ERD7 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.02■□□□□ 0.96
Tubb3Q9ERD7 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Tubb3Q9ERD7 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Tubb3Q9ERD7 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.95
Tubb3Q9ERD7 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Tubb3Q9ERD7 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Tubb3Q9ERD7 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Tubb3Q9ERD7 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tubb3Q9ERD7 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.01■□□□□ 0.95
Tubb3Q9ERD7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Tubb3Q9ERD7 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21■□□□□ 0.95
Tubb3Q9ERD7 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21■□□□□ 0.95
Tubb3Q9ERD7 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tubb3Q9ERD7 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tubb3Q9ERD7 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tubb3Q9ERD7 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21■□□□□ 0.95
Tubb3Q9ERD7 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tubb3Q9ERD7 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Tubb3Q9ERD7 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Tubb3Q9ERD7 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tubb3Q9ERD7 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms