Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Trim13Q9CYB0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim13Q9CYB0 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim13Q9CYB0 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim13Q9CYB0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.59■□□□□ 0.73
Trim13Q9CYB0 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim13Q9CYB0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Trim13Q9CYB0 Gm45364-201ENSMUST00000210883 159 ntBASIC19.59■□□□□ 0.73
Trim13Q9CYB0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim13Q9CYB0 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim13Q9CYB0 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim13Q9CYB0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim13Q9CYB0 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Trim13Q9CYB0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim13Q9CYB0 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.58■□□□□ 0.73
Trim13Q9CYB0 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim13Q9CYB0 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim13Q9CYB0 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim13Q9CYB0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim13Q9CYB0 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Trim13Q9CYB0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.57■□□□□ 0.72
Trim13Q9CYB0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim13Q9CYB0 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim13Q9CYB0 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.56■□□□□ 0.72
Trim13Q9CYB0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim13Q9CYB0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Trim13Q9CYB0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Trim13Q9CYB0 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim13Q9CYB0 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim13Q9CYB0 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.55■□□□□ 0.72
Trim13Q9CYB0 Gm7432-201ENSMUST00000210343 879 ntBASIC19.55■□□□□ 0.72
Trim13Q9CYB0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim13Q9CYB0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
Trim13Q9CYB0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim13Q9CYB0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim13Q9CYB0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Trim13Q9CYB0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim13Q9CYB0 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Trim13Q9CYB0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim13Q9CYB0 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.54■□□□□ 0.72
Trim13Q9CYB0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim13Q9CYB0 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim13Q9CYB0 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim13Q9CYB0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim13Q9CYB0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim13Q9CYB0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
Trim13Q9CYB0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim13Q9CYB0 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim13Q9CYB0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim13Q9CYB0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim13Q9CYB0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim13Q9CYB0 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
Trim13Q9CYB0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim13Q9CYB0 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim13Q9CYB0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trim13Q9CYB0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trim13Q9CYB0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trim13Q9CYB0 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim13Q9CYB0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim13Q9CYB0 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim13Q9CYB0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Trim13Q9CYB0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Trim13Q9CYB0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.51■□□□□ 0.71
Trim13Q9CYB0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim13Q9CYB0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim13Q9CYB0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim13Q9CYB0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
Trim13Q9CYB0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim13Q9CYB0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.5■□□□□ 0.71
Trim13Q9CYB0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Trim13Q9CYB0 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Trim13Q9CYB0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Trim13Q9CYB0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim13Q9CYB0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim13Q9CYB0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Trim13Q9CYB0 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim13Q9CYB0 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Trim13Q9CYB0 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.49■□□□□ 0.71
Trim13Q9CYB0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Trim13Q9CYB0 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim13Q9CYB0 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim13Q9CYB0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trim13Q9CYB0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Trim13Q9CYB0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim13Q9CYB0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.48■□□□□ 0.71
Trim13Q9CYB0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trim13Q9CYB0 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.48■□□□□ 0.71
Trim13Q9CYB0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim13Q9CYB0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Trim13Q9CYB0 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.48■□□□□ 0.71
Trim13Q9CYB0 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.48■□□□□ 0.71
Trim13Q9CYB0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim13Q9CYB0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim13Q9CYB0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim13Q9CYB0 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.47■□□□□ 0.71
Trim13Q9CYB0 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim13Q9CYB0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Trim13Q9CYB0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim13Q9CYB0 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim13Q9CYB0 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms