Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Pdlim5Q8CI51 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pdlim5Q8CI51 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pdlim5Q8CI51 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pdlim5Q8CI51 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pdlim5Q8CI51 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pdlim5Q8CI51 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Pdlim5Q8CI51 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pdlim5Q8CI51 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Pdlim5Q8CI51 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pdlim5Q8CI51 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pdlim5Q8CI51 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pdlim5Q8CI51 Gm14523-201ENSMUST00000117260 558 ntBASIC19.61■□□□□ 0.73
Pdlim5Q8CI51 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pdlim5Q8CI51 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
Pdlim5Q8CI51 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pdlim5Q8CI51 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.6■□□□□ 0.73
Pdlim5Q8CI51 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pdlim5Q8CI51 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Pdlim5Q8CI51 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pdlim5Q8CI51 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pdlim5Q8CI51 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pdlim5Q8CI51 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pdlim5Q8CI51 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Pdlim5Q8CI51 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Pdlim5Q8CI51 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Pdlim5Q8CI51 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pdlim5Q8CI51 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.59■□□□□ 0.73
Pdlim5Q8CI51 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pdlim5Q8CI51 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pdlim5Q8CI51 Gm27502-201ENSMUST00000183495 199 ntBASIC19.59■□□□□ 0.73
Pdlim5Q8CI51 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pdlim5Q8CI51 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.59■□□□□ 0.73
Pdlim5Q8CI51 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pdlim5Q8CI51 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pdlim5Q8CI51 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pdlim5Q8CI51 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pdlim5Q8CI51 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.58■□□□□ 0.72
Pdlim5Q8CI51 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pdlim5Q8CI51 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Pdlim5Q8CI51 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pdlim5Q8CI51 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pdlim5Q8CI51 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.57■□□□□ 0.72
Pdlim5Q8CI51 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pdlim5Q8CI51 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pdlim5Q8CI51 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pdlim5Q8CI51 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pdlim5Q8CI51 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Pdlim5Q8CI51 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pdlim5Q8CI51 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pdlim5Q8CI51 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.56■□□□□ 0.72
Pdlim5Q8CI51 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pdlim5Q8CI51 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.56■□□□□ 0.72
Pdlim5Q8CI51 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pdlim5Q8CI51 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Pdlim5Q8CI51 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pdlim5Q8CI51 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pdlim5Q8CI51 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.55■□□□□ 0.72
Pdlim5Q8CI51 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pdlim5Q8CI51 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pdlim5Q8CI51 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pdlim5Q8CI51 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.54■□□□□ 0.72
Pdlim5Q8CI51 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pdlim5Q8CI51 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.54■□□□□ 0.72
Pdlim5Q8CI51 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pdlim5Q8CI51 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pdlim5Q8CI51 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pdlim5Q8CI51 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.54■□□□□ 0.72
Pdlim5Q8CI51 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pdlim5Q8CI51 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pdlim5Q8CI51 Gm7332-201ENSMUST00000118351 454 ntBASIC19.53■□□□□ 0.72
Pdlim5Q8CI51 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pdlim5Q8CI51 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pdlim5Q8CI51 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.53■□□□□ 0.72
Pdlim5Q8CI51 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pdlim5Q8CI51 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pdlim5Q8CI51 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.52■□□□□ 0.72
Pdlim5Q8CI51 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pdlim5Q8CI51 Mir6538-201ENSMUST00000183713 110 ntBASIC19.52■□□□□ 0.72
Pdlim5Q8CI51 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pdlim5Q8CI51 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Pdlim5Q8CI51 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pdlim5Q8CI51 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pdlim5Q8CI51 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Pdlim5Q8CI51 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pdlim5Q8CI51 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pdlim5Q8CI51 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pdlim5Q8CI51 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Pdlim5Q8CI51 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pdlim5Q8CI51 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pdlim5Q8CI51 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.5■□□□□ 0.71
Pdlim5Q8CI51 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pdlim5Q8CI51 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pdlim5Q8CI51 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.5■□□□□ 0.71
Pdlim5Q8CI51 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pdlim5Q8CI51 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pdlim5Q8CI51 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pdlim5Q8CI51 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pdlim5Q8CI51 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pdlim5Q8CI51 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms