Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.45■□□□□ 0.54
Smg1Q8BKX6 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Smg1Q8BKX6 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smg1Q8BKX6 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.45■□□□□ 0.54
Smg1Q8BKX6 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Smg1Q8BKX6 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smg1Q8BKX6 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Smg1Q8BKX6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Smg1Q8BKX6 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smg1Q8BKX6 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.45■□□□□ 0.54
Smg1Q8BKX6 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smg1Q8BKX6 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Smg1Q8BKX6 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smg1Q8BKX6 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Smg1Q8BKX6 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Smg1Q8BKX6 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smg1Q8BKX6 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Smg1Q8BKX6 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smg1Q8BKX6 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Smg1Q8BKX6 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.43■□□□□ 0.54
Smg1Q8BKX6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smg1Q8BKX6 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.42■□□□□ 0.54
Smg1Q8BKX6 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Smg1Q8BKX6 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smg1Q8BKX6 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Smg1Q8BKX6 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smg1Q8BKX6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Smg1Q8BKX6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smg1Q8BKX6 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smg1Q8BKX6 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.41■□□□□ 0.54
Smg1Q8BKX6 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Smg1Q8BKX6 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.41■□□□□ 0.54
Smg1Q8BKX6 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smg1Q8BKX6 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Smg1Q8BKX6 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Smg1Q8BKX6 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.41■□□□□ 0.54
Smg1Q8BKX6 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Smg1Q8BKX6 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Smg1Q8BKX6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smg1Q8BKX6 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smg1Q8BKX6 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.41■□□□□ 0.54
Smg1Q8BKX6 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smg1Q8BKX6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.4■□□□□ 0.54
Smg1Q8BKX6 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smg1Q8BKX6 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smg1Q8BKX6 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smg1Q8BKX6 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smg1Q8BKX6 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Smg1Q8BKX6 Gm27405-201ENSMUST00000184201 112 ntBASIC18.39■□□□□ 0.54
Smg1Q8BKX6 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Smg1Q8BKX6 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Smg1Q8BKX6 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smg1Q8BKX6 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.39■□□□□ 0.53
Smg1Q8BKX6 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Smg1Q8BKX6 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smg1Q8BKX6 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smg1Q8BKX6 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smg1Q8BKX6 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smg1Q8BKX6 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Smg1Q8BKX6 Gm37179-201ENSMUST00000194862 823 ntBASIC18.38■□□□□ 0.53
Smg1Q8BKX6 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.38■□□□□ 0.53
Smg1Q8BKX6 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smg1Q8BKX6 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smg1Q8BKX6 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smg1Q8BKX6 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smg1Q8BKX6 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smg1Q8BKX6 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Smg1Q8BKX6 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Smg1Q8BKX6 Spcs1-204ENSMUST00000226782 949 ntBASIC18.37■□□□□ 0.53
Smg1Q8BKX6 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.36■□□□□ 0.53
Smg1Q8BKX6 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smg1Q8BKX6 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smg1Q8BKX6 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smg1Q8BKX6 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smg1Q8BKX6 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smg1Q8BKX6 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smg1Q8BKX6 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smg1Q8BKX6 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smg1Q8BKX6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smg1Q8BKX6 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smg1Q8BKX6 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.35■□□□□ 0.53
Smg1Q8BKX6 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smg1Q8BKX6 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smg1Q8BKX6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smg1Q8BKX6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smg1Q8BKX6 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smg1Q8BKX6 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.34■□□□□ 0.53
Smg1Q8BKX6 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smg1Q8BKX6 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.34■□□□□ 0.53
Smg1Q8BKX6 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smg1Q8BKX6 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.34■□□□□ 0.53
Smg1Q8BKX6 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smg1Q8BKX6 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.33■□□□□ 0.53
Smg1Q8BKX6 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smg1Q8BKX6 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smg1Q8BKX6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smg1Q8BKX6 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.33■□□□□ 0.52
Smg1Q8BKX6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Smg1Q8BKX6 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smg1Q8BKX6 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms