Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ParpbpQ6IRT3 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ParpbpQ6IRT3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
ParpbpQ6IRT3 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ParpbpQ6IRT3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
ParpbpQ6IRT3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ParpbpQ6IRT3 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.92■□□□□ 0.78
ParpbpQ6IRT3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ParpbpQ6IRT3 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ParpbpQ6IRT3 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
ParpbpQ6IRT3 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.92■□□□□ 0.78
ParpbpQ6IRT3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ParpbpQ6IRT3 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ParpbpQ6IRT3 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ParpbpQ6IRT3 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ParpbpQ6IRT3 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ParpbpQ6IRT3 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.91■□□□□ 0.78
ParpbpQ6IRT3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ParpbpQ6IRT3 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ParpbpQ6IRT3 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ParpbpQ6IRT3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ParpbpQ6IRT3 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ParpbpQ6IRT3 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ParpbpQ6IRT3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ParpbpQ6IRT3 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ParpbpQ6IRT3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ParpbpQ6IRT3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ParpbpQ6IRT3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ParpbpQ6IRT3 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
ParpbpQ6IRT3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
ParpbpQ6IRT3 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ParpbpQ6IRT3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ParpbpQ6IRT3 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ParpbpQ6IRT3 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
ParpbpQ6IRT3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ParpbpQ6IRT3 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
ParpbpQ6IRT3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ParpbpQ6IRT3 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
ParpbpQ6IRT3 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ParpbpQ6IRT3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
ParpbpQ6IRT3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.87■□□□□ 0.77
ParpbpQ6IRT3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ParpbpQ6IRT3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
ParpbpQ6IRT3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ParpbpQ6IRT3 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
ParpbpQ6IRT3 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ParpbpQ6IRT3 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.86■□□□□ 0.77
ParpbpQ6IRT3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ParpbpQ6IRT3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ParpbpQ6IRT3 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.86■□□□□ 0.77
ParpbpQ6IRT3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.86■□□□□ 0.77
ParpbpQ6IRT3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
ParpbpQ6IRT3 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ParpbpQ6IRT3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ParpbpQ6IRT3 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ParpbpQ6IRT3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ParpbpQ6IRT3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
ParpbpQ6IRT3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ParpbpQ6IRT3 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ParpbpQ6IRT3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ParpbpQ6IRT3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ParpbpQ6IRT3 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.84■□□□□ 0.77
ParpbpQ6IRT3 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
ParpbpQ6IRT3 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ParpbpQ6IRT3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ParpbpQ6IRT3 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ParpbpQ6IRT3 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.84■□□□□ 0.77
ParpbpQ6IRT3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ParpbpQ6IRT3 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ParpbpQ6IRT3 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ParpbpQ6IRT3 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
ParpbpQ6IRT3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ParpbpQ6IRT3 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ParpbpQ6IRT3 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
ParpbpQ6IRT3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ParpbpQ6IRT3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
ParpbpQ6IRT3 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.83■□□□□ 0.76
ParpbpQ6IRT3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ParpbpQ6IRT3 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ParpbpQ6IRT3 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ParpbpQ6IRT3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ParpbpQ6IRT3 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ParpbpQ6IRT3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.82■□□□□ 0.76
ParpbpQ6IRT3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.82■□□□□ 0.76
ParpbpQ6IRT3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.82■□□□□ 0.76
ParpbpQ6IRT3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ParpbpQ6IRT3 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.81■□□□□ 0.76
ParpbpQ6IRT3 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ParpbpQ6IRT3 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.81■□□□□ 0.76
ParpbpQ6IRT3 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ParpbpQ6IRT3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.81■□□□□ 0.76
ParpbpQ6IRT3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ParpbpQ6IRT3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
ParpbpQ6IRT3 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
ParpbpQ6IRT3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ParpbpQ6IRT3 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
ParpbpQ6IRT3 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
ParpbpQ6IRT3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.8■□□□□ 0.76
ParpbpQ6IRT3 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.8■□□□□ 0.76
ParpbpQ6IRT3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms