Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC28.73■■■□□ 2.19
Cntnap1O54991 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
Cntnap1O54991 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC28.73■■■□□ 2.19
Cntnap1O54991 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Cntnap1O54991 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Cntnap1O54991 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Cntnap1O54991 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Cntnap1O54991 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Cntnap1O54991 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.19
Cntnap1O54991 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC28.72■■■□□ 2.19
Cntnap1O54991 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC28.72■■■□□ 2.19
Cntnap1O54991 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC28.72■■■□□ 2.19
Cntnap1O54991 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC28.72■■■□□ 2.19
Cntnap1O54991 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Cntnap1O54991 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
Cntnap1O54991 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC28.71■■■□□ 2.19
Cntnap1O54991 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC28.71■■■□□ 2.19
Cntnap1O54991 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
Cntnap1O54991 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Cntnap1O54991 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Cntnap1O54991 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC28.69■■■□□ 2.18
Cntnap1O54991 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Cntnap1O54991 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC28.68■■■□□ 2.18
Cntnap1O54991 Gm43173-201ENSMUST00000202246 593 ntBASIC28.68■■■□□ 2.18
Cntnap1O54991 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Cntnap1O54991 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Cntnap1O54991 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Cntnap1O54991 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Cntnap1O54991 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC28.66■■■□□ 2.18
Cntnap1O54991 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC28.66■■■□□ 2.18
Cntnap1O54991 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Cntnap1O54991 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Cntnap1O54991 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Cntnap1O54991 Gm12669-201ENSMUST00000122162 1009 ntBASIC28.65■■■□□ 2.18
Cntnap1O54991 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Cntnap1O54991 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC28.65■■■□□ 2.18
Cntnap1O54991 Wdr70-203ENSMUST00000227371 1130 ntBASIC28.65■■■□□ 2.18
Cntnap1O54991 Gm10493-201ENSMUST00000097270 612 ntBASIC28.64■■■□□ 2.18
Cntnap1O54991 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Cntnap1O54991 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Cntnap1O54991 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC28.64■■■□□ 2.17
Cntnap1O54991 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Cntnap1O54991 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Cntnap1O54991 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Cntnap1O54991 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Cntnap1O54991 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Cntnap1O54991 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Cntnap1O54991 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Cntnap1O54991 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC28.62■■■□□ 2.17
Cntnap1O54991 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Cntnap1O54991 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC28.61■■■□□ 2.17
Cntnap1O54991 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Cntnap1O54991 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Cntnap1O54991 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Cntnap1O54991 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC28.61■■■□□ 2.17
Cntnap1O54991 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC28.61■■■□□ 2.17
Cntnap1O54991 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Cntnap1O54991 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC28.6■■■□□ 2.17
Cntnap1O54991 Spcs1-204ENSMUST00000226782 949 ntBASIC28.6■■■□□ 2.17
Cntnap1O54991 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Cntnap1O54991 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC28.6■■■□□ 2.17
Cntnap1O54991 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Cntnap1O54991 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC28.59■■■□□ 2.17
Cntnap1O54991 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Cntnap1O54991 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC28.59■■■□□ 2.17
Cntnap1O54991 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
Cntnap1O54991 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC28.58■■■□□ 2.17
Cntnap1O54991 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Cntnap1O54991 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Cntnap1O54991 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Cntnap1O54991 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC28.57■■■□□ 2.16
Cntnap1O54991 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
Cntnap1O54991 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC28.57■■■□□ 2.16
Cntnap1O54991 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Cntnap1O54991 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC28.56■■■□□ 2.16
Cntnap1O54991 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Cntnap1O54991 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Cntnap1O54991 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Cntnap1O54991 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC28.55■■■□□ 2.16
Cntnap1O54991 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Cntnap1O54991 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Cntnap1O54991 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC28.54■■■□□ 2.16
Cntnap1O54991 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC28.53■■■□□ 2.16
Cntnap1O54991 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
Cntnap1O54991 Gm42642-201ENSMUST00000200683 355 ntBASIC28.53■■■□□ 2.16
Cntnap1O54991 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC28.53■■■□□ 2.16
Cntnap1O54991 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC28.53■■■□□ 2.16
Cntnap1O54991 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Cntnap1O54991 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Cntnap1O54991 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC28.52■■■□□ 2.16
Cntnap1O54991 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC28.51■■■□□ 2.16
Cntnap1O54991 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC28.51■■■□□ 2.16
Cntnap1O54991 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC28.51■■■□□ 2.16
Cntnap1O54991 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC28.51■■■□□ 2.15
Cntnap1O54991 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Cntnap1O54991 Gm12251-201ENSMUST00000117893 792 ntBASIC28.5■■■□□ 2.15
Cntnap1O54991 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC28.5■■■□□ 2.15
Cntnap1O54991 Cdc34b-202ENSMUST00000188741 1252 ntBASIC28.5■■■□□ 2.15
Cntnap1O54991 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC28.5■■■□□ 2.15
Cntnap1O54991 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms