Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Ebf3O08791 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Ebf3O08791 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ebf3O08791 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ebf3O08791 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC22.11■■□□□ 1.13
Ebf3O08791 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ebf3O08791 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ebf3O08791 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC22.1■■□□□ 1.13
Ebf3O08791 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ebf3O08791 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Ebf3O08791 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Ebf3O08791 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ebf3O08791 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ebf3O08791 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ebf3O08791 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ebf3O08791 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.09■■□□□ 1.13
Ebf3O08791 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ebf3O08791 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ebf3O08791 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ebf3O08791 AC117245.4-201ENSMUST00000217388 1646 ntBASIC22.09■■□□□ 1.13
Ebf3O08791 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ebf3O08791 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC22.08■■□□□ 1.13
Ebf3O08791 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC22.08■■□□□ 1.13
Ebf3O08791 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC22.08■■□□□ 1.13
Ebf3O08791 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ebf3O08791 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ebf3O08791 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ebf3O08791 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ebf3O08791 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ebf3O08791 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Ebf3O08791 Gm40881-201ENSMUST00000223397 166 ntBASIC22.06■■□□□ 1.12
Ebf3O08791 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ebf3O08791 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC22.05■■□□□ 1.12
Ebf3O08791 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Ebf3O08791 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC22.05■■□□□ 1.12
Ebf3O08791 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ebf3O08791 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ebf3O08791 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ebf3O08791 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC22.04■■□□□ 1.12
Ebf3O08791 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ebf3O08791 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC22.04■■□□□ 1.12
Ebf3O08791 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ebf3O08791 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Ebf3O08791 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ebf3O08791 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ebf3O08791 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ebf3O08791 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ebf3O08791 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ebf3O08791 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC22.03■■□□□ 1.12
Ebf3O08791 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Ebf3O08791 Gm22238-201ENSMUST00000175222 88 ntBASIC22.03■■□□□ 1.12
Ebf3O08791 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC22.03■■□□□ 1.12
Ebf3O08791 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC22.03■■□□□ 1.12
Ebf3O08791 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Ebf3O08791 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.03■■□□□ 1.12
Ebf3O08791 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Ebf3O08791 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ebf3O08791 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ebf3O08791 Gm11847-201ENSMUST00000125165 1119 ntBASIC22.02■■□□□ 1.12
Ebf3O08791 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Ebf3O08791 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC22.02■■□□□ 1.12
Ebf3O08791 Nsd1-206ENSMUST00000224918 1001 ntBASIC22.02■■□□□ 1.12
Ebf3O08791 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC22.02■■□□□ 1.12
Ebf3O08791 Gm13241-201ENSMUST00000094493 780 ntBASIC22.02■■□□□ 1.12
Ebf3O08791 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC22.02■■□□□ 1.12
Ebf3O08791 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ebf3O08791 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC22.01■■□□□ 1.11
Ebf3O08791 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ebf3O08791 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ebf3O08791 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ebf3O08791 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ebf3O08791 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ebf3O08791 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ebf3O08791 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Ebf3O08791 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC22■■□□□ 1.11
Ebf3O08791 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ebf3O08791 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ebf3O08791 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ebf3O08791 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ebf3O08791 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Ebf3O08791 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ebf3O08791 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ebf3O08791 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.99■■□□□ 1.11
Ebf3O08791 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.99■■□□□ 1.11
Ebf3O08791 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.99■■□□□ 1.11
Ebf3O08791 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ebf3O08791 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.99■■□□□ 1.11
Ebf3O08791 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ebf3O08791 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ebf3O08791 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ebf3O08791 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ebf3O08791 Gm9847-201ENSMUST00000052528 599 ntBASIC21.98■■□□□ 1.11
Ebf3O08791 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ebf3O08791 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Ebf3O08791 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ebf3O08791 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ebf3O08791 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ebf3O08791 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Ebf3O08791 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.97■■□□□ 1.11
Ebf3O08791 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms