Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.74■□□□□ 0.91
Colca2F8VPY8 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.73■□□□□ 0.91
Colca2F8VPY8 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Colca2F8VPY8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.73■□□□□ 0.91
Colca2F8VPY8 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Colca2F8VPY8 Gm6139-201ENSMUST00000079261 882 ntBASIC20.73■□□□□ 0.91
Colca2F8VPY8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Colca2F8VPY8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
Colca2F8VPY8 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Colca2F8VPY8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Colca2F8VPY8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Colca2F8VPY8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.72■□□□□ 0.91
Colca2F8VPY8 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Colca2F8VPY8 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Colca2F8VPY8 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Colca2F8VPY8 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.71■□□□□ 0.91
Colca2F8VPY8 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Colca2F8VPY8 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Colca2F8VPY8 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Colca2F8VPY8 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Colca2F8VPY8 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Colca2F8VPY8 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Colca2F8VPY8 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.7■□□□□ 0.9
Colca2F8VPY8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Colca2F8VPY8 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.69■□□□□ 0.9
Colca2F8VPY8 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Colca2F8VPY8 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Colca2F8VPY8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Colca2F8VPY8 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Colca2F8VPY8 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Colca2F8VPY8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
Colca2F8VPY8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Colca2F8VPY8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Colca2F8VPY8 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.68■□□□□ 0.9
Colca2F8VPY8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Colca2F8VPY8 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Colca2F8VPY8 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Colca2F8VPY8 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.67■□□□□ 0.9
Colca2F8VPY8 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.67■□□□□ 0.9
Colca2F8VPY8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Colca2F8VPY8 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Colca2F8VPY8 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Colca2F8VPY8 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Colca2F8VPY8 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.66■□□□□ 0.9
Colca2F8VPY8 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Colca2F8VPY8 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.66■□□□□ 0.9
Colca2F8VPY8 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Colca2F8VPY8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.66■□□□□ 0.9
Colca2F8VPY8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Colca2F8VPY8 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.65■□□□□ 0.9
Colca2F8VPY8 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Colca2F8VPY8 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Colca2F8VPY8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Colca2F8VPY8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Colca2F8VPY8 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Colca2F8VPY8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Colca2F8VPY8 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Colca2F8VPY8 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.64■□□□□ 0.89
Colca2F8VPY8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Colca2F8VPY8 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Colca2F8VPY8 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Colca2F8VPY8 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
Colca2F8VPY8 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Colca2F8VPY8 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Colca2F8VPY8 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Colca2F8VPY8 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.89
Colca2F8VPY8 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Colca2F8VPY8 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Colca2F8VPY8 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Colca2F8VPY8 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Colca2F8VPY8 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.63■□□□□ 0.89
Colca2F8VPY8 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Colca2F8VPY8 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Colca2F8VPY8 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Colca2F8VPY8 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.62■□□□□ 0.89
Colca2F8VPY8 Gm9870-201ENSMUST00000063874 645 ntBASIC20.62■□□□□ 0.89
Colca2F8VPY8 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Colca2F8VPY8 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Colca2F8VPY8 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Colca2F8VPY8 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.61■□□□□ 0.89
Colca2F8VPY8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Colca2F8VPY8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Colca2F8VPY8 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Colca2F8VPY8 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Colca2F8VPY8 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Colca2F8VPY8 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.6■□□□□ 0.89
Colca2F8VPY8 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.6■□□□□ 0.89
Colca2F8VPY8 Gm43137-201ENSMUST00000198052 594 ntBASIC20.6■□□□□ 0.89
Colca2F8VPY8 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.6■□□□□ 0.89
Colca2F8VPY8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Colca2F8VPY8 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Colca2F8VPY8 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Colca2F8VPY8 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.59■□□□□ 0.89
Colca2F8VPY8 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Colca2F8VPY8 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Colca2F8VPY8 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Colca2F8VPY8 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Colca2F8VPY8 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Colca2F8VPY8 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Colca2F8VPY8 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms