Protein–RNA interactions for Protein: A0A0A6YWI9

Ighv1-11, Immunoglobulin heavy variable V1-11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-11A0A0A6YWI9 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ighv1-11A0A0A6YWI9 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Ighv1-11A0A0A6YWI9 Gm44428-201ENSMUST00000204474 874 ntBASIC15.04■□□□□ -0
Ighv1-11A0A0A6YWI9 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ighv1-11A0A0A6YWI9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Ighv1-11A0A0A6YWI9 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ighv1-11A0A0A6YWI9 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ighv1-11A0A0A6YWI9 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ighv1-11A0A0A6YWI9 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ighv1-11A0A0A6YWI9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ighv1-11A0A0A6YWI9 Gm11687-201ENSMUST00000118911 886 ntBASIC15.03■□□□□ -0
Ighv1-11A0A0A6YWI9 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ighv1-11A0A0A6YWI9 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC15.03■□□□□ -0
Ighv1-11A0A0A6YWI9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ighv1-11A0A0A6YWI9 Gm42418-201ENSMUST00000182010 1831 ntBASIC15.03■□□□□ -0
Ighv1-11A0A0A6YWI9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ighv1-11A0A0A6YWI9 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ighv1-11A0A0A6YWI9 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Ighv1-11A0A0A6YWI9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ighv1-11A0A0A6YWI9 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC15.02■□□□□ -0
Ighv1-11A0A0A6YWI9 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ighv1-11A0A0A6YWI9 Gm16437-201ENSMUST00000025669 507 ntBASIC15.02■□□□□ -0
Ighv1-11A0A0A6YWI9 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ighv1-11A0A0A6YWI9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ighv1-11A0A0A6YWI9 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC15.02□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ighv1-11A0A0A6YWI9 AC117245.4-201ENSMUST00000217388 1646 ntBASIC15.01□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC15.01□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC14.99□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC14.99□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC14.98□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC14.98□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC14.97□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-11A0A0A6YWI9 AC117769.4-201ENSMUST00000225679 685 ntBASIC14.96□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-11A0A0A6YWI9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ighv1-11A0A0A6YWI9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC14.94□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC14.94□□□□□ -0.02
Ighv1-11A0A0A6YWI9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC14.94□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC14.93□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms