Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav16nA0A075B634 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav16nA0A075B634 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC16.06■□□□□ 0.16
Trav16nA0A075B634 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav16nA0A075B634 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trav16nA0A075B634 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav16nA0A075B634 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav16nA0A075B634 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trav16nA0A075B634 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav16nA0A075B634 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Trav16nA0A075B634 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trav16nA0A075B634 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav16nA0A075B634 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.05■□□□□ 0.16
Trav16nA0A075B634 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trav16nA0A075B634 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav16nA0A075B634 Gm12818-201ENSMUST00000117562 1349 ntBASIC16.05■□□□□ 0.16
Trav16nA0A075B634 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav16nA0A075B634 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC16.05■□□□□ 0.16
Trav16nA0A075B634 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC16.05■□□□□ 0.16
Trav16nA0A075B634 Mir3960-201ENSMUST00000198213 73 ntBASIC16.05■□□□□ 0.16
Trav16nA0A075B634 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Trav16nA0A075B634 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav16nA0A075B634 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav16nA0A075B634 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav16nA0A075B634 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav16nA0A075B634 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav16nA0A075B634 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav16nA0A075B634 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav16nA0A075B634 Gm42418-201ENSMUST00000182010 1831 ntBASIC16.04■□□□□ 0.16
Trav16nA0A075B634 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav16nA0A075B634 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav16nA0A075B634 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav16nA0A075B634 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav16nA0A075B634 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav16nA0A075B634 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav16nA0A075B634 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav16nA0A075B634 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav16nA0A075B634 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Trav16nA0A075B634 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav16nA0A075B634 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav16nA0A075B634 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.02■□□□□ 0.16
Trav16nA0A075B634 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav16nA0A075B634 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Trav16nA0A075B634 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav16nA0A075B634 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav16nA0A075B634 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav16nA0A075B634 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.02■□□□□ 0.15
Trav16nA0A075B634 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav16nA0A075B634 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav16nA0A075B634 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav16nA0A075B634 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav16nA0A075B634 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav16nA0A075B634 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Trav16nA0A075B634 AC154454.1-201ENSMUST00000225253 216 ntBASIC16.01■□□□□ 0.15
Trav16nA0A075B634 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav16nA0A075B634 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav16nA0A075B634 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav16nA0A075B634 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trav16nA0A075B634 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav16nA0A075B634 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC16■□□□□ 0.15
Trav16nA0A075B634 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16■□□□□ 0.15
Trav16nA0A075B634 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16■□□□□ 0.15
Trav16nA0A075B634 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav16nA0A075B634 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trav16nA0A075B634 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16■□□□□ 0.15
Trav16nA0A075B634 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav16nA0A075B634 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav16nA0A075B634 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav16nA0A075B634 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav16nA0A075B634 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Trav16nA0A075B634 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Trav16nA0A075B634 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Trav16nA0A075B634 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Trav16nA0A075B634 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav16nA0A075B634 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC15.99■□□□□ 0.15
Trav16nA0A075B634 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Trav16nA0A075B634 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Trav16nA0A075B634 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav16nA0A075B634 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav16nA0A075B634 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav16nA0A075B634 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Trav16nA0A075B634 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav16nA0A075B634 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav16nA0A075B634 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav16nA0A075B634 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Trav16nA0A075B634 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav16nA0A075B634 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav16nA0A075B634 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav16nA0A075B634 Hsf1-207ENSMUST00000228371 2102 ntBASIC15.97■□□□□ 0.15
Trav16nA0A075B634 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav16nA0A075B634 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav16nA0A075B634 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav16nA0A075B634 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav16nA0A075B634 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav16nA0A075B634 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC15.96■□□□□ 0.15
Trav16nA0A075B634 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav16nA0A075B634 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav16nA0A075B634 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Trav16nA0A075B634 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav16nA0A075B634 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms