Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 Gm8602-201ENSMUST00000184045 607 ntBASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 Gm28911-201ENSMUST00000188837 117 ntBASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tubb3Q9ERD7 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Gm24420-201ENSMUST00000176676 59 ntBASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Gm9002-201ENSMUST00000178437 499 ntBASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tubb3Q9ERD7 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tubb3Q9ERD7 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Tubb3Q9ERD7 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tubb3Q9ERD7 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tubb3Q9ERD7 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.11□□□□□ -0.31
Tubb3Q9ERD7 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tubb3Q9ERD7 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tubb3Q9ERD7 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tubb3Q9ERD7 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tubb3Q9ERD7 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tubb3Q9ERD7 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tubb3Q9ERD7 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tubb3Q9ERD7 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Tubb3Q9ERD7 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tubb3Q9ERD7 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tubb3Q9ERD7 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Tubb3Q9ERD7 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tubb3Q9ERD7 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tubb3Q9ERD7 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.11□□□□□ -0.31
Tubb3Q9ERD7 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.11□□□□□ -0.31
Tubb3Q9ERD7 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.11□□□□□ -0.31
Tubb3Q9ERD7 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.11□□□□□ -0.31
Tubb3Q9ERD7 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.11□□□□□ -0.31
Tubb3Q9ERD7 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tubb3Q9ERD7 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Tubb3Q9ERD7 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tubb3Q9ERD7 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tubb3Q9ERD7 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms