Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps28Q9D1C8 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps28Q9D1C8 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps28Q9D1C8 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Vps28Q9D1C8 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps28Q9D1C8 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps28Q9D1C8 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps28Q9D1C8 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps28Q9D1C8 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps28Q9D1C8 Gm11803-201ENSMUST00000119966 444 ntBASIC13.54□□□□□ -0.24
Vps28Q9D1C8 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.54□□□□□ -0.24
Vps28Q9D1C8 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.54□□□□□ -0.24
Vps28Q9D1C8 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps28Q9D1C8 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.54□□□□□ -0.24
Vps28Q9D1C8 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.54□□□□□ -0.24
Vps28Q9D1C8 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps28Q9D1C8 Proscos-202ENSMUST00000178990 666 ntBASIC13.54□□□□□ -0.24
Vps28Q9D1C8 Gm24196-201ENSMUST00000179161 110 ntBASIC13.54□□□□□ -0.24
Vps28Q9D1C8 Gm29649-201ENSMUST00000185649 419 ntBASIC13.54□□□□□ -0.24
Vps28Q9D1C8 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.54□□□□□ -0.24
Vps28Q9D1C8 Gm7561-201ENSMUST00000211203 886 ntBASIC13.54□□□□□ -0.24
Vps28Q9D1C8 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.54□□□□□ -0.24
Vps28Q9D1C8 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps28Q9D1C8 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps28Q9D1C8 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Vps28Q9D1C8 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps28Q9D1C8 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Vps28Q9D1C8 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps28Q9D1C8 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.54□□□□□ -0.24
Vps28Q9D1C8 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.54□□□□□ -0.24
Vps28Q9D1C8 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps28Q9D1C8 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps28Q9D1C8 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps28Q9D1C8 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.54□□□□□ -0.24
Vps28Q9D1C8 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Vps28Q9D1C8 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.54□□□□□ -0.24
Vps28Q9D1C8 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps28Q9D1C8 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.54□□□□□ -0.24
Vps28Q9D1C8 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps28Q9D1C8 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps28Q9D1C8 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps28Q9D1C8 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps28Q9D1C8 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps28Q9D1C8 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps28Q9D1C8 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps28Q9D1C8 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps28Q9D1C8 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps28Q9D1C8 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.53□□□□□ -0.24
Vps28Q9D1C8 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps28Q9D1C8 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps28Q9D1C8 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps28Q9D1C8 Gm8213-201ENSMUST00000118191 441 ntBASIC13.53□□□□□ -0.24
Vps28Q9D1C8 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.53□□□□□ -0.24
Vps28Q9D1C8 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.53□□□□□ -0.24
Vps28Q9D1C8 Gm11425-201ENSMUST00000119608 498 ntBASIC13.53□□□□□ -0.24
Vps28Q9D1C8 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps28Q9D1C8 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps28Q9D1C8 Gm8810-201ENSMUST00000172895 754 ntBASIC13.53□□□□□ -0.24
Vps28Q9D1C8 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps28Q9D1C8 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.53□□□□□ -0.24
Vps28Q9D1C8 Gm18062-201ENSMUST00000208020 547 ntBASIC13.53□□□□□ -0.24
Vps28Q9D1C8 Gm18055-201ENSMUST00000208254 547 ntBASIC13.53□□□□□ -0.24
Vps28Q9D1C8 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps28Q9D1C8 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.53□□□□□ -0.24
Vps28Q9D1C8 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps28Q9D1C8 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps28Q9D1C8 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps28Q9D1C8 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Vps28Q9D1C8 Gm16372-201ENSMUST00000073088 450 ntBASIC13.53□□□□□ -0.24
Vps28Q9D1C8 Gm9396-201ENSMUST00000076703 567 ntBASIC13.53□□□□□ -0.24
Vps28Q9D1C8 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps28Q9D1C8 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Vps28Q9D1C8 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps28Q9D1C8 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Vps28Q9D1C8 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.53□□□□□ -0.24
Vps28Q9D1C8 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps28Q9D1C8 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.53□□□□□ -0.24
Vps28Q9D1C8 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps28Q9D1C8 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps28Q9D1C8 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps28Q9D1C8 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps28Q9D1C8 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps28Q9D1C8 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps28Q9D1C8 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Vps28Q9D1C8 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps28Q9D1C8 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Vps28Q9D1C8 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Vps28Q9D1C8 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps28Q9D1C8 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps28Q9D1C8 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps28Q9D1C8 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps28Q9D1C8 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Vps28Q9D1C8 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Vps28Q9D1C8 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.52□□□□□ -0.24
Vps28Q9D1C8 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Vps28Q9D1C8 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Vps28Q9D1C8 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.52□□□□□ -0.24
Vps28Q9D1C8 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps28Q9D1C8 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps28Q9D1C8 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms