Protein–RNA interactions for Protein: Q9D0Z3

Tmem53, Transmembrane protein 53, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem53Q9D0Z3 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tmem53Q9D0Z3 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tmem53Q9D0Z3 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tmem53Q9D0Z3 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.75□□□□□ -0.37
Tmem53Q9D0Z3 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tmem53Q9D0Z3 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tmem53Q9D0Z3 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tmem53Q9D0Z3 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tmem53Q9D0Z3 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Tmem53Q9D0Z3 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tmem53Q9D0Z3 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tmem53Q9D0Z3 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tmem53Q9D0Z3 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tmem53Q9D0Z3 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tmem53Q9D0Z3 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tmem53Q9D0Z3 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tmem53Q9D0Z3 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Tmem53Q9D0Z3 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tmem53Q9D0Z3 Map1b-203ENSMUST00000223725 2669 ntBASIC12.74□□□□□ -0.37
Tmem53Q9D0Z3 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tmem53Q9D0Z3 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tmem53Q9D0Z3 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tmem53Q9D0Z3 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tmem53Q9D0Z3 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.74□□□□□ -0.37
Tmem53Q9D0Z3 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tmem53Q9D0Z3 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tmem53Q9D0Z3 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Tmem53Q9D0Z3 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tmem53Q9D0Z3 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tmem53Q9D0Z3 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tmem53Q9D0Z3 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.74□□□□□ -0.37
Tmem53Q9D0Z3 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Tmem53Q9D0Z3 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tmem53Q9D0Z3 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Tmem53Q9D0Z3 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tmem53Q9D0Z3 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.74□□□□□ -0.37
Tmem53Q9D0Z3 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tmem53Q9D0Z3 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tmem53Q9D0Z3 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tmem53Q9D0Z3 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tmem53Q9D0Z3 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tmem53Q9D0Z3 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.73□□□□□ -0.37
Tmem53Q9D0Z3 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tmem53Q9D0Z3 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tmem53Q9D0Z3 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Tmem53Q9D0Z3 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.73□□□□□ -0.37
Tmem53Q9D0Z3 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tmem53Q9D0Z3 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Tmem53Q9D0Z3 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Tmem53Q9D0Z3 Gm11918-201ENSMUST00000121660 179 ntBASIC12.73□□□□□ -0.37
Tmem53Q9D0Z3 Gm12138-201ENSMUST00000122180 951 ntBASIC12.73□□□□□ -0.37
Tmem53Q9D0Z3 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tmem53Q9D0Z3 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.73□□□□□ -0.37
Tmem53Q9D0Z3 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tmem53Q9D0Z3 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tmem53Q9D0Z3 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.73□□□□□ -0.37
Tmem53Q9D0Z3 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.73□□□□□ -0.37
Tmem53Q9D0Z3 Gm45384-201ENSMUST00000210451 277 ntBASIC12.73□□□□□ -0.37
Tmem53Q9D0Z3 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tmem53Q9D0Z3 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tmem53Q9D0Z3 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tmem53Q9D0Z3 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tmem53Q9D0Z3 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tmem53Q9D0Z3 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Tmem53Q9D0Z3 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.73□□□□□ -0.37
Tmem53Q9D0Z3 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tmem53Q9D0Z3 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tmem53Q9D0Z3 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tmem53Q9D0Z3 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tmem53Q9D0Z3 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tmem53Q9D0Z3 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tmem53Q9D0Z3 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.72□□□□□ -0.37
Tmem53Q9D0Z3 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.72□□□□□ -0.37
Tmem53Q9D0Z3 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Tmem53Q9D0Z3 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tmem53Q9D0Z3 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Tmem53Q9D0Z3 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tmem53Q9D0Z3 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tmem53Q9D0Z3 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tmem53Q9D0Z3 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tmem53Q9D0Z3 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tmem53Q9D0Z3 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tmem53Q9D0Z3 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tmem53Q9D0Z3 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tmem53Q9D0Z3 Mir698-201ENSMUST00000102164 109 ntBASIC12.72□□□□□ -0.37
Tmem53Q9D0Z3 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.72□□□□□ -0.37
Tmem53Q9D0Z3 Gm11478-201ENSMUST00000117851 599 ntBASIC12.72□□□□□ -0.37
Tmem53Q9D0Z3 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tmem53Q9D0Z3 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tmem53Q9D0Z3 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.72□□□□□ -0.37
Tmem53Q9D0Z3 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
Tmem53Q9D0Z3 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.72□□□□□ -0.37
Tmem53Q9D0Z3 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.72□□□□□ -0.37
Tmem53Q9D0Z3 Gm18307-201ENSMUST00000206864 949 ntBASIC12.72□□□□□ -0.37
Tmem53Q9D0Z3 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.72□□□□□ -0.37
Tmem53Q9D0Z3 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.72□□□□□ -0.37
Tmem53Q9D0Z3 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.72□□□□□ -0.37
Tmem53Q9D0Z3 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tmem53Q9D0Z3 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tmem53Q9D0Z3 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms