Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shmt2Q9CZN7 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shmt2Q9CZN7 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shmt2Q9CZN7 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shmt2Q9CZN7 Gm15823-201ENSMUST00000064305 670 ntBASIC12.63□□□□□ -0.39
Shmt2Q9CZN7 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shmt2Q9CZN7 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Shmt2Q9CZN7 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shmt2Q9CZN7 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Shmt2Q9CZN7 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shmt2Q9CZN7 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.63□□□□□ -0.39
Shmt2Q9CZN7 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Shmt2Q9CZN7 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.63□□□□□ -0.39
Shmt2Q9CZN7 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Shmt2Q9CZN7 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Shmt2Q9CZN7 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shmt2Q9CZN7 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Shmt2Q9CZN7 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shmt2Q9CZN7 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.62□□□□□ -0.39
Shmt2Q9CZN7 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shmt2Q9CZN7 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shmt2Q9CZN7 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shmt2Q9CZN7 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shmt2Q9CZN7 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shmt2Q9CZN7 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
Shmt2Q9CZN7 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Shmt2Q9CZN7 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shmt2Q9CZN7 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shmt2Q9CZN7 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shmt2Q9CZN7 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.62□□□□□ -0.39
Shmt2Q9CZN7 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Shmt2Q9CZN7 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Shmt2Q9CZN7 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Shmt2Q9CZN7 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.62□□□□□ -0.39
Shmt2Q9CZN7 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shmt2Q9CZN7 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.62□□□□□ -0.39
Shmt2Q9CZN7 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.62□□□□□ -0.39
Shmt2Q9CZN7 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.62□□□□□ -0.39
Shmt2Q9CZN7 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.62□□□□□ -0.39
Shmt2Q9CZN7 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.62□□□□□ -0.39
Shmt2Q9CZN7 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shmt2Q9CZN7 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.62□□□□□ -0.39
Shmt2Q9CZN7 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.62□□□□□ -0.39
Shmt2Q9CZN7 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shmt2Q9CZN7 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shmt2Q9CZN7 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Shmt2Q9CZN7 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shmt2Q9CZN7 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shmt2Q9CZN7 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shmt2Q9CZN7 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Shmt2Q9CZN7 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shmt2Q9CZN7 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Shmt2Q9CZN7 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Shmt2Q9CZN7 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shmt2Q9CZN7 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shmt2Q9CZN7 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Shmt2Q9CZN7 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms