Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Khdc3Q9CWU5 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc3Q9CWU5 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc3Q9CWU5 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc3Q9CWU5 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc3Q9CWU5 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Khdc3Q9CWU5 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc3Q9CWU5 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc3Q9CWU5 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc3Q9CWU5 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc3Q9CWU5 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc3Q9CWU5 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Khdc3Q9CWU5 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Khdc3Q9CWU5 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Khdc3Q9CWU5 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc3Q9CWU5 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc3Q9CWU5 Gm13689-201ENSMUST00000119360 685 ntBASIC12.68□□□□□ -0.38
Khdc3Q9CWU5 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.68□□□□□ -0.38
Khdc3Q9CWU5 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Khdc3Q9CWU5 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc3Q9CWU5 Mir6392-201ENSMUST00000184924 108 ntBASIC12.68□□□□□ -0.38
Khdc3Q9CWU5 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.68□□□□□ -0.38
Khdc3Q9CWU5 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.68□□□□□ -0.38
Khdc3Q9CWU5 Gm18624-201ENSMUST00000220966 658 ntBASIC12.68□□□□□ -0.38
Khdc3Q9CWU5 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.68□□□□□ -0.38
Khdc3Q9CWU5 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.68□□□□□ -0.38
Khdc3Q9CWU5 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc3Q9CWU5 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Khdc3Q9CWU5 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc3Q9CWU5 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc3Q9CWU5 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc3Q9CWU5 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc3Q9CWU5 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc3Q9CWU5 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc3Q9CWU5 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc3Q9CWU5 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc3Q9CWU5 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc3Q9CWU5 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc3Q9CWU5 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Khdc3Q9CWU5 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Khdc3Q9CWU5 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.67□□□□□ -0.38
Khdc3Q9CWU5 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Khdc3Q9CWU5 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Khdc3Q9CWU5 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Khdc3Q9CWU5 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Khdc3Q9CWU5 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Khdc3Q9CWU5 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Khdc3Q9CWU5 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Khdc3Q9CWU5 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Khdc3Q9CWU5 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Khdc3Q9CWU5 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Khdc3Q9CWU5 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Khdc3Q9CWU5 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Khdc3Q9CWU5 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Khdc3Q9CWU5 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Khdc3Q9CWU5 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Khdc3Q9CWU5 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Khdc3Q9CWU5 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.67□□□□□ -0.38
Khdc3Q9CWU5 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.67□□□□□ -0.38
Khdc3Q9CWU5 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.67□□□□□ -0.38
Khdc3Q9CWU5 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Khdc3Q9CWU5 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.67□□□□□ -0.38
Khdc3Q9CWU5 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.67□□□□□ -0.38
Khdc3Q9CWU5 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Khdc3Q9CWU5 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Khdc3Q9CWU5 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Khdc3Q9CWU5 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Khdc3Q9CWU5 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Khdc3Q9CWU5 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Khdc3Q9CWU5 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Khdc3Q9CWU5 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Khdc3Q9CWU5 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Khdc3Q9CWU5 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Khdc3Q9CWU5 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Khdc3Q9CWU5 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Khdc3Q9CWU5 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Khdc3Q9CWU5 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Khdc3Q9CWU5 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Khdc3Q9CWU5 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Khdc3Q9CWU5 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Khdc3Q9CWU5 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Khdc3Q9CWU5 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.66□□□□□ -0.38
Khdc3Q9CWU5 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Khdc3Q9CWU5 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Khdc3Q9CWU5 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Khdc3Q9CWU5 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Khdc3Q9CWU5 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Khdc3Q9CWU5 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Khdc3Q9CWU5 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Khdc3Q9CWU5 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Khdc3Q9CWU5 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Khdc3Q9CWU5 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Khdc3Q9CWU5 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.66□□□□□ -0.38
Khdc3Q9CWU5 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.66□□□□□ -0.38
Khdc3Q9CWU5 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.66□□□□□ -0.38
Khdc3Q9CWU5 Gm38223-201ENSMUST00000194484 695 ntBASIC12.66□□□□□ -0.38
Khdc3Q9CWU5 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.66□□□□□ -0.38
Khdc3Q9CWU5 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Khdc3Q9CWU5 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Khdc3Q9CWU5 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 119.8 ms