Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm12341-201ENSMUST00000119724 503 ntBASIC15.05■□□□□ -0
Trim11Q99PQ2 Gm16342-201ENSMUST00000124025 1025 ntBASIC15.05■□□□□ -0
Trim11Q99PQ2 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.05■□□□□ -0
Trim11Q99PQ2 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim11Q99PQ2 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim11Q99PQ2 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim11Q99PQ2 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.05■□□□□ -0
Trim11Q99PQ2 Gm9755-201ENSMUST00000032981 1356 ntBASIC15.05■□□□□ -0
Trim11Q99PQ2 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim11Q99PQ2 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trim11Q99PQ2 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trim11Q99PQ2 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim11Q99PQ2 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim11Q99PQ2 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim11Q99PQ2 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim11Q99PQ2 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trim11Q99PQ2 Gm45003-201ENSMUST00000205875 2158 ntBASIC15.05■□□□□ -0
Trim11Q99PQ2 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trim11Q99PQ2 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trim11Q99PQ2 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim11Q99PQ2 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim11Q99PQ2 Gm44401-201ENSMUST00000204462 2375 ntBASIC15.05■□□□□ -0
Trim11Q99PQ2 AC121805.2-201ENSMUST00000218808 2538 ntBASIC15.05■□□□□ -0
Trim11Q99PQ2 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim11Q99PQ2 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim11Q99PQ2 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim11Q99PQ2 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim11Q99PQ2 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim11Q99PQ2 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim11Q99PQ2 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC15.04■□□□□ -0
Trim11Q99PQ2 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trim11Q99PQ2 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC15.04■□□□□ -0
Trim11Q99PQ2 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim11Q99PQ2 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim11Q99PQ2 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim11Q99PQ2 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim11Q99PQ2 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim11Q99PQ2 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim11Q99PQ2 Gm7558-201ENSMUST00000193221 1165 ntBASIC15.04■□□□□ -0
Trim11Q99PQ2 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC15.04■□□□□ -0
Trim11Q99PQ2 Gm18307-201ENSMUST00000206864 949 ntBASIC15.04■□□□□ -0
Trim11Q99PQ2 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC15.04■□□□□ -0
Trim11Q99PQ2 AC156560.2-201ENSMUST00000221232 264 ntBASIC15.04■□□□□ -0
Trim11Q99PQ2 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim11Q99PQ2 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim11Q99PQ2 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Trim11Q99PQ2 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim11Q99PQ2 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim11Q99PQ2 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim11Q99PQ2 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trim11Q99PQ2 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim11Q99PQ2 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim11Q99PQ2 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim11Q99PQ2 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim11Q99PQ2 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trim11Q99PQ2 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim11Q99PQ2 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC15.03■□□□□ -0
Trim11Q99PQ2 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC15.03■□□□□ -0
Trim11Q99PQ2 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim11Q99PQ2 Gm13689-201ENSMUST00000119360 685 ntBASIC15.03■□□□□ -0
Trim11Q99PQ2 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim11Q99PQ2 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC15.03■□□□□ -0
Trim11Q99PQ2 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim11Q99PQ2 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim11Q99PQ2 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim11Q99PQ2 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.03■□□□□ -0
Trim11Q99PQ2 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC15.03■□□□□ -0
Trim11Q99PQ2 Gm44985-201ENSMUST00000206202 1016 ntBASIC15.03■□□□□ -0
Trim11Q99PQ2 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim11Q99PQ2 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trim11Q99PQ2 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim11Q99PQ2 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trim11Q99PQ2 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim11Q99PQ2 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim11Q99PQ2 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim11Q99PQ2 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim11Q99PQ2 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim11Q99PQ2 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim11Q99PQ2 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim11Q99PQ2 Gm45643-201ENSMUST00000211364 1484 ntBASIC15.02■□□□□ -0
Trim11Q99PQ2 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim11Q99PQ2 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Trim11Q99PQ2 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim11Q99PQ2 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim11Q99PQ2 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim11Q99PQ2 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim11Q99PQ2 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Trim11Q99PQ2 Gm6447-201ENSMUST00000118905 835 ntBASIC15.02■□□□□ -0
Trim11Q99PQ2 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC15.02■□□□□ -0
Trim11Q99PQ2 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC15.02■□□□□ -0
Trim11Q99PQ2 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC15.02■□□□□ -0
Trim11Q99PQ2 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC15.02■□□□□ -0
Trim11Q99PQ2 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim11Q99PQ2 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Trim11Q99PQ2 Gm10040-201ENSMUST00000080726 1662 ntBASIC15.02□□□□□ -0.01
Trim11Q99PQ2 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim11Q99PQ2 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Trim11Q99PQ2 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim11Q99PQ2 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC15.02□□□□□ -0.01
Trim11Q99PQ2 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms