Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm10774-201ENSMUST00000188689 204 ntBASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh23Q99PF4 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh23Q99PF4 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Gm8018-201ENSMUST00000173536 789 ntBASIC13.09□□□□□ -0.31
Cdh23Q99PF4 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh23Q99PF4 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cdh23Q99PF4 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
Cdh23Q99PF4 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cdh23Q99PF4 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cdh23Q99PF4 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cdh23Q99PF4 Gm21998-201ENSMUST00000117552 1308 ntBASIC13.08□□□□□ -0.32
Cdh23Q99PF4 Gm12628-201ENSMUST00000122193 382 ntBASIC13.08□□□□□ -0.32
Cdh23Q99PF4 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh23Q99PF4 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC13.08□□□□□ -0.32
Cdh23Q99PF4 Mir6998-201ENSMUST00000183343 64 ntBASIC13.08□□□□□ -0.32
Cdh23Q99PF4 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Cdh23Q99PF4 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Cdh23Q99PF4 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh23Q99PF4 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh23Q99PF4 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh23Q99PF4 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh23Q99PF4 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.08□□□□□ -0.32
Cdh23Q99PF4 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Cdh23Q99PF4 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh23Q99PF4 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh23Q99PF4 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC13.08□□□□□ -0.32
Cdh23Q99PF4 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Cdh23Q99PF4 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh23Q99PF4 Gm28882-201ENSMUST00000185504 314 ntBASIC13.08□□□□□ -0.32
Cdh23Q99PF4 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC13.08□□□□□ -0.32
Cdh23Q99PF4 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Cdh23Q99PF4 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh23Q99PF4 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh23Q99PF4 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh23Q99PF4 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh23Q99PF4 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Cdh23Q99PF4 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC13.07□□□□□ -0.32
Cdh23Q99PF4 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC13.07□□□□□ -0.32
Cdh23Q99PF4 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC13.07□□□□□ -0.32
Cdh23Q99PF4 Gm3793-201ENSMUST00000204973 672 ntBASIC13.07□□□□□ -0.32
Cdh23Q99PF4 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh23Q99PF4 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh23Q99PF4 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh23Q99PF4 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh23Q99PF4 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.07□□□□□ -0.32
Cdh23Q99PF4 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh23Q99PF4 Gm39404-201ENSMUST00000216350 313 ntBASIC13.07□□□□□ -0.32
Cdh23Q99PF4 AC126799.1-201ENSMUST00000221976 246 ntBASIC13.07□□□□□ -0.32
Cdh23Q99PF4 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh23Q99PF4 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh23Q99PF4 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh23Q99PF4 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh23Q99PF4 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh23Q99PF4 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh23Q99PF4 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh23Q99PF4 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh23Q99PF4 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.07□□□□□ -0.32
Cdh23Q99PF4 Gm14644-201ENSMUST00000116671 647 ntBASIC13.07□□□□□ -0.32
Cdh23Q99PF4 Gm11980-201ENSMUST00000121445 986 ntBASIC13.07□□□□□ -0.32
Cdh23Q99PF4 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh23Q99PF4 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Cdh23Q99PF4 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh23Q99PF4 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.07□□□□□ -0.32
Cdh23Q99PF4 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh23Q99PF4 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Cdh23Q99PF4 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh23Q99PF4 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cdh23Q99PF4 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh23Q99PF4 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh23Q99PF4 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh23Q99PF4 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh23Q99PF4 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Cdh23Q99PF4 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh23Q99PF4 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh23Q99PF4 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh23Q99PF4 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh23Q99PF4 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh23Q99PF4 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.06□□□□□ -0.32
Cdh23Q99PF4 Mup-ps26-201ENSMUST00000121751 202 ntBASIC13.06□□□□□ -0.32
Cdh23Q99PF4 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh23Q99PF4 Gm43778-201ENSMUST00000199438 199 ntBASIC13.06□□□□□ -0.32
Cdh23Q99PF4 Gm9132-201ENSMUST00000210182 832 ntBASIC13.06□□□□□ -0.32
Cdh23Q99PF4 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC13.06□□□□□ -0.32
Cdh23Q99PF4 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh23Q99PF4 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh23Q99PF4 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh23Q99PF4 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms