Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tlr3Q99MB1 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tlr3Q99MB1 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tlr3Q99MB1 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tlr3Q99MB1 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Tlr3Q99MB1 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.18□□□□□ -0.14
Tlr3Q99MB1 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tlr3Q99MB1 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tlr3Q99MB1 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tlr3Q99MB1 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tlr3Q99MB1 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tlr3Q99MB1 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tlr3Q99MB1 Gm12928-201ENSMUST00000117115 573 ntBASIC14.18□□□□□ -0.14
Tlr3Q99MB1 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.18□□□□□ -0.14
Tlr3Q99MB1 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC14.18□□□□□ -0.14
Tlr3Q99MB1 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.18□□□□□ -0.14
Tlr3Q99MB1 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tlr3Q99MB1 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.18□□□□□ -0.14
Tlr3Q99MB1 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.18□□□□□ -0.14
Tlr3Q99MB1 Gm27839-201ENSMUST00000184242 106 ntBASIC14.18□□□□□ -0.14
Tlr3Q99MB1 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.18□□□□□ -0.14
Tlr3Q99MB1 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Tlr3Q99MB1 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tlr3Q99MB1 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tlr3Q99MB1 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Tlr3Q99MB1 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tlr3Q99MB1 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.18□□□□□ -0.14
Tlr3Q99MB1 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tlr3Q99MB1 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tlr3Q99MB1 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tlr3Q99MB1 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tlr3Q99MB1 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tlr3Q99MB1 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.18□□□□□ -0.14
Tlr3Q99MB1 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tlr3Q99MB1 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tlr3Q99MB1 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tlr3Q99MB1 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tlr3Q99MB1 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tlr3Q99MB1 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tlr3Q99MB1 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tlr3Q99MB1 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tlr3Q99MB1 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.17□□□□□ -0.14
Tlr3Q99MB1 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tlr3Q99MB1 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tlr3Q99MB1 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tlr3Q99MB1 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tlr3Q99MB1 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Tlr3Q99MB1 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.17□□□□□ -0.14
Tlr3Q99MB1 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Tlr3Q99MB1 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Tlr3Q99MB1 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Tlr3Q99MB1 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.17□□□□□ -0.14
Tlr3Q99MB1 Mir1894-201ENSMUST00000122802 81 ntBASIC14.17□□□□□ -0.14
Tlr3Q99MB1 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.17□□□□□ -0.14
Tlr3Q99MB1 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tlr3Q99MB1 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tlr3Q99MB1 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tlr3Q99MB1 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tlr3Q99MB1 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tlr3Q99MB1 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tlr3Q99MB1 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tlr3Q99MB1 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tlr3Q99MB1 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tlr3Q99MB1 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tlr3Q99MB1 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.17□□□□□ -0.14
Tlr3Q99MB1 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tlr3Q99MB1 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tlr3Q99MB1 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tlr3Q99MB1 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Tlr3Q99MB1 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tlr3Q99MB1 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tlr3Q99MB1 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.16□□□□□ -0.14
Tlr3Q99MB1 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tlr3Q99MB1 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tlr3Q99MB1 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.16□□□□□ -0.14
Tlr3Q99MB1 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tlr3Q99MB1 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tlr3Q99MB1 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tlr3Q99MB1 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tlr3Q99MB1 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.16□□□□□ -0.14
Tlr3Q99MB1 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tlr3Q99MB1 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tlr3Q99MB1 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.16□□□□□ -0.14
Tlr3Q99MB1 Gm6244-201ENSMUST00000178732 841 ntBASIC14.16□□□□□ -0.14
Tlr3Q99MB1 Mir6420-201ENSMUST00000185032 102 ntBASIC14.16□□□□□ -0.14
Tlr3Q99MB1 Gm19931-201ENSMUST00000198920 368 ntBASIC14.16□□□□□ -0.14
Tlr3Q99MB1 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.16□□□□□ -0.14
Tlr3Q99MB1 Gm8463-201ENSMUST00000208573 613 ntBASIC14.16□□□□□ -0.14
Tlr3Q99MB1 Gm18473-201ENSMUST00000220543 868 ntBASIC14.16□□□□□ -0.14
Tlr3Q99MB1 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tlr3Q99MB1 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Tlr3Q99MB1 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tlr3Q99MB1 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.16□□□□□ -0.14
Tlr3Q99MB1 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tlr3Q99MB1 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.16□□□□□ -0.14
Tlr3Q99MB1 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tlr3Q99MB1 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tlr3Q99MB1 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Tlr3Q99MB1 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Tlr3Q99MB1 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms