Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc4Q99J62 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc4Q99J62 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc4Q99J62 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.17■□□□□ 0.02
Rfc4Q99J62 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc4Q99J62 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc4Q99J62 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc4Q99J62 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc4Q99J62 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc4Q99J62 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc4Q99J62 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfc4Q99J62 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
Rfc4Q99J62 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rfc4Q99J62 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rfc4Q99J62 Il17rd-203ENSMUST00000225146 3366 ntBASIC15.16■□□□□ 0.02
Rfc4Q99J62 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rfc4Q99J62 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rfc4Q99J62 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfc4Q99J62 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfc4Q99J62 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfc4Q99J62 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfc4Q99J62 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfc4Q99J62 Gm12715-201ENSMUST00000121430 1128 ntBASIC15.16■□□□□ 0.02
Rfc4Q99J62 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC15.16■□□□□ 0.02
Rfc4Q99J62 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC15.16■□□□□ 0.02
Rfc4Q99J62 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC15.16■□□□□ 0.02
Rfc4Q99J62 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC15.16■□□□□ 0.02
Rfc4Q99J62 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Rfc4Q99J62 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rfc4Q99J62 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rfc4Q99J62 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfc4Q99J62 Gm43138-201ENSMUST00000199123 708 ntBASIC15.16■□□□□ 0.02
Rfc4Q99J62 Gm6458-201ENSMUST00000211573 635 ntBASIC15.16■□□□□ 0.02
Rfc4Q99J62 Gm30285-201ENSMUST00000214614 422 ntBASIC15.16■□□□□ 0.02
Rfc4Q99J62 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC15.16■□□□□ 0.02
Rfc4Q99J62 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Rfc4Q99J62 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC15.16■□□□□ 0.02
Rfc4Q99J62 Gm7899-201ENSMUST00000192935 1897 ntBASIC15.16■□□□□ 0.02
Rfc4Q99J62 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfc4Q99J62 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC15.16■□□□□ 0.02
Rfc4Q99J62 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rfc4Q99J62 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rfc4Q99J62 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfc4Q99J62 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfc4Q99J62 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfc4Q99J62 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rfc4Q99J62 Gm13316-201ENSMUST00000140537 691 ntBASIC15.15■□□□□ 0.02
Rfc4Q99J62 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC15.15■□□□□ 0.02
Rfc4Q99J62 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rfc4Q99J62 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfc4Q99J62 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Rfc4Q99J62 Gm26956-201ENSMUST00000182176 986 ntBASIC15.15■□□□□ 0.02
Rfc4Q99J62 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rfc4Q99J62 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC15.15■□□□□ 0.02
Rfc4Q99J62 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC15.15■□□□□ 0.02
Rfc4Q99J62 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Rfc4Q99J62 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Rfc4Q99J62 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfc4Q99J62 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfc4Q99J62 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfc4Q99J62 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rfc4Q99J62 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfc4Q99J62 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Rfc4Q99J62 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rfc4Q99J62 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfc4Q99J62 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfc4Q99J62 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfc4Q99J62 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC15.14■□□□□ 0.01
Rfc4Q99J62 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfc4Q99J62 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
Rfc4Q99J62 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rfc4Q99J62 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rfc4Q99J62 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rfc4Q99J62 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfc4Q99J62 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Rfc4Q99J62 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rfc4Q99J62 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfc4Q99J62 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rfc4Q99J62 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rfc4Q99J62 Gm24830-201ENSMUST00000102024 166 ntBASIC15.14■□□□□ 0.01
Rfc4Q99J62 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rfc4Q99J62 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfc4Q99J62 Gm12502-201ENSMUST00000120197 444 ntBASIC15.14■□□□□ 0.01
Rfc4Q99J62 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC15.14■□□□□ 0.01
Rfc4Q99J62 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC15.14■□□□□ 0.01
Rfc4Q99J62 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC15.14■□□□□ 0.01
Rfc4Q99J62 Gm25890-201ENSMUST00000177643 165 ntBASIC15.14■□□□□ 0.01
Rfc4Q99J62 Rnu1b2-201ENSMUST00000178073 165 ntBASIC15.14■□□□□ 0.01
Rfc4Q99J62 Rnu1b1-201ENSMUST00000178250 165 ntBASIC15.14■□□□□ 0.01
Rfc4Q99J62 Gm22614-201ENSMUST00000178300 165 ntBASIC15.14■□□□□ 0.01
Rfc4Q99J62 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC15.14■□□□□ 0.01
Rfc4Q99J62 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC15.14■□□□□ 0.01
Rfc4Q99J62 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfc4Q99J62 Gm22042-201ENSMUST00000082989 165 ntBASIC15.14■□□□□ 0.01
Rfc4Q99J62 Gm26232-201ENSMUST00000083360 166 ntBASIC15.14■□□□□ 0.01
Rfc4Q99J62 Gm24136-201ENSMUST00000083374 165 ntBASIC15.14■□□□□ 0.01
Rfc4Q99J62 Rnu1b6-201ENSMUST00000083839 166 ntBASIC15.14■□□□□ 0.01
Rfc4Q99J62 Gm26110-201ENSMUST00000083971 165 ntBASIC15.14■□□□□ 0.01
Rfc4Q99J62 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfc4Q99J62 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms