Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.77□□□□□ -0.53
Thumpd1Q99J36 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Thumpd1Q99J36 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.77□□□□□ -0.53
Thumpd1Q99J36 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Thumpd1Q99J36 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Thumpd1Q99J36 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Thumpd1Q99J36 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Thumpd1Q99J36 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Thumpd1Q99J36 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Thumpd1Q99J36 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Thumpd1Q99J36 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Thumpd1Q99J36 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Thumpd1Q99J36 Pck2-205ENSMUST00000226352 2784 ntBASIC11.77□□□□□ -0.53
Thumpd1Q99J36 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Thumpd1Q99J36 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Thumpd1Q99J36 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Thumpd1Q99J36 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.77□□□□□ -0.53
Thumpd1Q99J36 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Thumpd1Q99J36 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Thumpd1Q99J36 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.76□□□□□ -0.53
Thumpd1Q99J36 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.76□□□□□ -0.53
Thumpd1Q99J36 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thumpd1Q99J36 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Gm25948-201ENSMUST00000175334 112 ntBASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Gm44335-201ENSMUST00000196879 141 ntBASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Gm44297-201ENSMUST00000198304 141 ntBASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Gm44346-201ENSMUST00000198851 141 ntBASIC11.76□□□□□ -0.53
Thumpd1Q99J36 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Thumpd1Q99J36 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.76□□□□□ -0.53
Thumpd1Q99J36 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Thumpd1Q99J36 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.75□□□□□ -0.53
Thumpd1Q99J36 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.75□□□□□ -0.53
Thumpd1Q99J36 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Thumpd1Q99J36 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thumpd1Q99J36 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Thumpd1Q99J36 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thumpd1Q99J36 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thumpd1Q99J36 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Thumpd1Q99J36 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thumpd1Q99J36 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Thumpd1Q99J36 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thumpd1Q99J36 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Thumpd1Q99J36 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thumpd1Q99J36 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.75□□□□□ -0.53
Thumpd1Q99J36 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Thumpd1Q99J36 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.75□□□□□ -0.53
Thumpd1Q99J36 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Thumpd1Q99J36 Gm6415-201ENSMUST00000118488 348 ntBASIC11.75□□□□□ -0.53
Thumpd1Q99J36 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Thumpd1Q99J36 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC11.75□□□□□ -0.53
Thumpd1Q99J36 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.75□□□□□ -0.53
Thumpd1Q99J36 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Thumpd1Q99J36 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Thumpd1Q99J36 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Thumpd1Q99J36 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.75□□□□□ -0.53
Thumpd1Q99J36 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.75□□□□□ -0.53
Thumpd1Q99J36 AC130671.1-201ENSMUST00000227384 1237 ntBASIC11.75□□□□□ -0.53
Thumpd1Q99J36 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thumpd1Q99J36 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Thumpd1Q99J36 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thumpd1Q99J36 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thumpd1Q99J36 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Thumpd1Q99J36 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms