Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb2Q91Y00 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb2Q91Y00 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb2Q91Y00 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb2Q91Y00 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb2Q91Y00 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb2Q91Y00 Gm12390-201ENSMUST00000117897 397 ntBASIC14.03□□□□□ -0.16
Pcdhb2Q91Y00 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdhb2Q91Y00 Gm11803-201ENSMUST00000119966 444 ntBASIC14.03□□□□□ -0.16
Pcdhb2Q91Y00 Gm10156-201ENSMUST00000122364 462 ntBASIC14.03□□□□□ -0.16
Pcdhb2Q91Y00 Gm8810-201ENSMUST00000172895 754 ntBASIC14.03□□□□□ -0.16
Pcdhb2Q91Y00 Proscos-202ENSMUST00000178990 666 ntBASIC14.03□□□□□ -0.16
Pcdhb2Q91Y00 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Pcdhb2Q91Y00 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.03□□□□□ -0.16
Pcdhb2Q91Y00 Gm18062-201ENSMUST00000208020 547 ntBASIC14.03□□□□□ -0.16
Pcdhb2Q91Y00 Gm18055-201ENSMUST00000208254 547 ntBASIC14.03□□□□□ -0.16
Pcdhb2Q91Y00 Gm7561-201ENSMUST00000211203 886 ntBASIC14.03□□□□□ -0.16
Pcdhb2Q91Y00 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.03□□□□□ -0.16
Pcdhb2Q91Y00 Gm8598-201ENSMUST00000221184 836 ntBASIC14.03□□□□□ -0.16
Pcdhb2Q91Y00 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb2Q91Y00 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb2Q91Y00 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb2Q91Y00 Gm25857-201ENSMUST00000082788 129 ntBASIC14.03□□□□□ -0.16
Pcdhb2Q91Y00 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhb2Q91Y00 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb2Q91Y00 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb2Q91Y00 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb2Q91Y00 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb2Q91Y00 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb2Q91Y00 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhb2Q91Y00 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhb2Q91Y00 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb2Q91Y00 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb2Q91Y00 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb2Q91Y00 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb2Q91Y00 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Pcdhb2Q91Y00 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhb2Q91Y00 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb2Q91Y00 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb2Q91Y00 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb2Q91Y00 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb2Q91Y00 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb2Q91Y00 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb2Q91Y00 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb2Q91Y00 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Pcdhb2Q91Y00 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb2Q91Y00 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb2Q91Y00 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb2Q91Y00 Gm38116-201ENSMUST00000193873 1533 ntBASIC14.02□□□□□ -0.16
Pcdhb2Q91Y00 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb2Q91Y00 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb2Q91Y00 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.02□□□□□ -0.17
Pcdhb2Q91Y00 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb2Q91Y00 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb2Q91Y00 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Pcdhb2Q91Y00 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.02□□□□□ -0.17
Pcdhb2Q91Y00 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb2Q91Y00 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.02□□□□□ -0.17
Pcdhb2Q91Y00 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.02□□□□□ -0.17
Pcdhb2Q91Y00 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.02□□□□□ -0.17
Pcdhb2Q91Y00 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb2Q91Y00 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Pcdhb2Q91Y00 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Pcdhb2Q91Y00 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb2Q91Y00 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb2Q91Y00 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb2Q91Y00 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb2Q91Y00 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb2Q91Y00 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb2Q91Y00 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb2Q91Y00 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb2Q91Y00 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Pcdhb2Q91Y00 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb2Q91Y00 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb2Q91Y00 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb2Q91Y00 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb2Q91Y00 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdhb2Q91Y00 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdhb2Q91Y00 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pcdhb2Q91Y00 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Pcdhb2Q91Y00 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb2Q91Y00 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb2Q91Y00 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb2Q91Y00 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdhb2Q91Y00 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb2Q91Y00 Gm14350-201ENSMUST00000116642 640 ntBASIC14.01□□□□□ -0.17
Pcdhb2Q91Y00 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdhb2Q91Y00 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb2Q91Y00 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.01□□□□□ -0.17
Pcdhb2Q91Y00 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb2Q91Y00 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.01□□□□□ -0.17
Pcdhb2Q91Y00 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb2Q91Y00 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdhb2Q91Y00 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb2Q91Y00 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdhb2Q91Y00 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb2Q91Y00 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pcdhb2Q91Y00 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb2Q91Y00 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb2Q91Y00 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms