Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim60Q8VI40 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim60Q8VI40 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trim60Q8VI40 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim60Q8VI40 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trim60Q8VI40 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim60Q8VI40 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Trim60Q8VI40 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim60Q8VI40 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim60Q8VI40 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trim60Q8VI40 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim60Q8VI40 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim60Q8VI40 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim60Q8VI40 Gm9522-201ENSMUST00000182394 926 ntBASIC13.66□□□□□ -0.22
Trim60Q8VI40 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim60Q8VI40 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trim60Q8VI40 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.66□□□□□ -0.22
Trim60Q8VI40 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trim60Q8VI40 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim60Q8VI40 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim60Q8VI40 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim60Q8VI40 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trim60Q8VI40 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim60Q8VI40 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim60Q8VI40 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim60Q8VI40 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim60Q8VI40 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.66□□□□□ -0.22
Trim60Q8VI40 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim60Q8VI40 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim60Q8VI40 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim60Q8VI40 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trim60Q8VI40 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim60Q8VI40 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim60Q8VI40 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim60Q8VI40 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim60Q8VI40 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim60Q8VI40 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim60Q8VI40 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim60Q8VI40 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trim60Q8VI40 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim60Q8VI40 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.65□□□□□ -0.22
Trim60Q8VI40 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim60Q8VI40 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim60Q8VI40 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim60Q8VI40 Gm11524-201ENSMUST00000119349 807 ntBASIC13.65□□□□□ -0.22
Trim60Q8VI40 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim60Q8VI40 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim60Q8VI40 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim60Q8VI40 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trim60Q8VI40 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim60Q8VI40 Gm5279-201ENSMUST00000199575 745 ntBASIC13.65□□□□□ -0.22
Trim60Q8VI40 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim60Q8VI40 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.65□□□□□ -0.22
Trim60Q8VI40 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim60Q8VI40 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim60Q8VI40 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim60Q8VI40 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trim60Q8VI40 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim60Q8VI40 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Trim60Q8VI40 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim60Q8VI40 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim60Q8VI40 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim60Q8VI40 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim60Q8VI40 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim60Q8VI40 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim60Q8VI40 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim60Q8VI40 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim60Q8VI40 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim60Q8VI40 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trim60Q8VI40 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim60Q8VI40 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Trim60Q8VI40 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Gm26464-201ENSMUST00000157094 305 ntBASIC13.64□□□□□ -0.23
Trim60Q8VI40 Gm21854-201ENSMUST00000179901 471 ntBASIC13.64□□□□□ -0.23
Trim60Q8VI40 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim60Q8VI40 Gm27306-201ENSMUST00000183970 107 ntBASIC13.64□□□□□ -0.23
Trim60Q8VI40 Gm43094-201ENSMUST00000196549 921 ntBASIC13.64□□□□□ -0.23
Trim60Q8VI40 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms