Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Vps4aQ8VEJ9 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vps4aQ8VEJ9 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Vps4aQ8VEJ9 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps4aQ8VEJ9 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
Vps4aQ8VEJ9 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps4aQ8VEJ9 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps4aQ8VEJ9 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps4aQ8VEJ9 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps4aQ8VEJ9 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Vps4aQ8VEJ9 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.85□□□□□ -0.35
Vps4aQ8VEJ9 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.85□□□□□ -0.35
Vps4aQ8VEJ9 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps4aQ8VEJ9 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.85□□□□□ -0.35
Vps4aQ8VEJ9 Gm12585-201ENSMUST00000117307 290 ntBASIC12.85□□□□□ -0.35
Vps4aQ8VEJ9 Gm24420-201ENSMUST00000176676 59 ntBASIC12.85□□□□□ -0.35
Vps4aQ8VEJ9 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.85□□□□□ -0.35
Vps4aQ8VEJ9 Gm27701-201ENSMUST00000184498 110 ntBASIC12.85□□□□□ -0.35
Vps4aQ8VEJ9 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.85□□□□□ -0.35
Vps4aQ8VEJ9 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.85□□□□□ -0.35
Vps4aQ8VEJ9 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vps4aQ8VEJ9 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Vps4aQ8VEJ9 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Vps4aQ8VEJ9 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps4aQ8VEJ9 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Vps4aQ8VEJ9 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps4aQ8VEJ9 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps4aQ8VEJ9 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps4aQ8VEJ9 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps4aQ8VEJ9 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vps4aQ8VEJ9 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps4aQ8VEJ9 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps4aQ8VEJ9 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.85□□□□□ -0.35
Vps4aQ8VEJ9 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps4aQ8VEJ9 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps4aQ8VEJ9 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Vps4aQ8VEJ9 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vps4aQ8VEJ9 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps4aQ8VEJ9 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vps4aQ8VEJ9 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vps4aQ8VEJ9 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps4aQ8VEJ9 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps4aQ8VEJ9 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.84□□□□□ -0.35
Vps4aQ8VEJ9 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Vps4aQ8VEJ9 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps4aQ8VEJ9 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.84□□□□□ -0.35
Vps4aQ8VEJ9 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.84□□□□□ -0.35
Vps4aQ8VEJ9 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps4aQ8VEJ9 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.84□□□□□ -0.35
Vps4aQ8VEJ9 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.84□□□□□ -0.35
Vps4aQ8VEJ9 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.84□□□□□ -0.35
Vps4aQ8VEJ9 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.84□□□□□ -0.35
Vps4aQ8VEJ9 Gm28911-201ENSMUST00000188837 117 ntBASIC12.84□□□□□ -0.35
Vps4aQ8VEJ9 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vps4aQ8VEJ9 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.84□□□□□ -0.35
Vps4aQ8VEJ9 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.84□□□□□ -0.35
Vps4aQ8VEJ9 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.84□□□□□ -0.35
Vps4aQ8VEJ9 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps4aQ8VEJ9 Gm5356-201ENSMUST00000093326 615 ntBASIC12.84□□□□□ -0.35
Vps4aQ8VEJ9 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps4aQ8VEJ9 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps4aQ8VEJ9 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps4aQ8VEJ9 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps4aQ8VEJ9 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps4aQ8VEJ9 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Vps4aQ8VEJ9 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps4aQ8VEJ9 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps4aQ8VEJ9 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps4aQ8VEJ9 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms