Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ebf4Q8K4J2 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf4Q8K4J2 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf4Q8K4J2 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf4Q8K4J2 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf4Q8K4J2 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ebf4Q8K4J2 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.01□□□□□ -0.49
Ebf4Q8K4J2 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf4Q8K4J2 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf4Q8K4J2 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf4Q8K4J2 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf4Q8K4J2 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf4Q8K4J2 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Ebf4Q8K4J2 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf4Q8K4J2 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Ebf4Q8K4J2 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf4Q8K4J2 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf4Q8K4J2 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.01□□□□□ -0.49
Ebf4Q8K4J2 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Ebf4Q8K4J2 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf4Q8K4J2 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf4Q8K4J2 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf4Q8K4J2 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf4Q8K4J2 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ebf4Q8K4J2 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ebf4Q8K4J2 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf4Q8K4J2 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf4Q8K4J2 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf4Q8K4J2 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf4Q8K4J2 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf4Q8K4J2 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf4Q8K4J2 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ebf4Q8K4J2 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12□□□□□ -0.49
Ebf4Q8K4J2 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12□□□□□ -0.49
Ebf4Q8K4J2 Gm9449-201ENSMUST00000207265 1011 ntBASIC12□□□□□ -0.49
Ebf4Q8K4J2 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf4Q8K4J2 AC154222.1-201ENSMUST00000223882 475 ntBASIC12□□□□□ -0.49
Ebf4Q8K4J2 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12□□□□□ -0.49
Ebf4Q8K4J2 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ebf4Q8K4J2 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf4Q8K4J2 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12□□□□□ -0.49
Ebf4Q8K4J2 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf4Q8K4J2 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf4Q8K4J2 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ebf4Q8K4J2 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf4Q8K4J2 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf4Q8K4J2 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ebf4Q8K4J2 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ebf4Q8K4J2 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf4Q8K4J2 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ebf4Q8K4J2 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf4Q8K4J2 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ebf4Q8K4J2 Gm18983-201ENSMUST00000222884 2729 ntBASIC12□□□□□ -0.49
Ebf4Q8K4J2 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf4Q8K4J2 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ebf4Q8K4J2 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf4Q8K4J2 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf4Q8K4J2 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Ebf4Q8K4J2 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf4Q8K4J2 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.99□□□□□ -0.49
Ebf4Q8K4J2 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf4Q8K4J2 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Ebf4Q8K4J2 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.99□□□□□ -0.49
Ebf4Q8K4J2 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf4Q8K4J2 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf4Q8K4J2 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf4Q8K4J2 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf4Q8K4J2 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf4Q8K4J2 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf4Q8K4J2 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC11.99□□□□□ -0.49
Ebf4Q8K4J2 Gm18737-201ENSMUST00000173594 937 ntBASIC11.99□□□□□ -0.49
Ebf4Q8K4J2 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC11.99□□□□□ -0.49
Ebf4Q8K4J2 AC138767.1-201ENSMUST00000222661 415 ntBASIC11.99□□□□□ -0.49
Ebf4Q8K4J2 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf4Q8K4J2 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf4Q8K4J2 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Ebf4Q8K4J2 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf4Q8K4J2 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf4Q8K4J2 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf4Q8K4J2 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf4Q8K4J2 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf4Q8K4J2 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf4Q8K4J2 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf4Q8K4J2 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf4Q8K4J2 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf4Q8K4J2 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf4Q8K4J2 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf4Q8K4J2 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.99□□□□□ -0.49
Ebf4Q8K4J2 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf4Q8K4J2 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf4Q8K4J2 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf4Q8K4J2 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms