Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cchcr1Q8K2I2 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cchcr1Q8K2I2 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.63■□□□□ 0.09
Cchcr1Q8K2I2 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cchcr1Q8K2I2 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cchcr1Q8K2I2 Gm3365-201ENSMUST00000216296 1480 ntBASIC15.63■□□□□ 0.09
Cchcr1Q8K2I2 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cchcr1Q8K2I2 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cchcr1Q8K2I2 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cchcr1Q8K2I2 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cchcr1Q8K2I2 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cchcr1Q8K2I2 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cchcr1Q8K2I2 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cchcr1Q8K2I2 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cchcr1Q8K2I2 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cchcr1Q8K2I2 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cchcr1Q8K2I2 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cchcr1Q8K2I2 Ntrk2-204ENSMUST00000224259 3049 ntBASIC15.62■□□□□ 0.09
Cchcr1Q8K2I2 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cchcr1Q8K2I2 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC15.62■□□□□ 0.09
Cchcr1Q8K2I2 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Cchcr1Q8K2I2 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cchcr1Q8K2I2 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC15.62■□□□□ 0.09
Cchcr1Q8K2I2 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cchcr1Q8K2I2 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cchcr1Q8K2I2 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC15.62■□□□□ 0.09
Cchcr1Q8K2I2 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC15.62■□□□□ 0.09
Cchcr1Q8K2I2 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.62■□□□□ 0.09
Cchcr1Q8K2I2 AC154276.1-201ENSMUST00000228874 1299 ntBASIC15.62■□□□□ 0.09
Cchcr1Q8K2I2 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cchcr1Q8K2I2 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cchcr1Q8K2I2 Rn7sk-201ENSMUST00000083103 331 ntBASIC15.62■□□□□ 0.09
Cchcr1Q8K2I2 Gm26315-201ENSMUST00000083890 321 ntBASIC15.62■□□□□ 0.09
Cchcr1Q8K2I2 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cchcr1Q8K2I2 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cchcr1Q8K2I2 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cchcr1Q8K2I2 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cchcr1Q8K2I2 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cchcr1Q8K2I2 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cchcr1Q8K2I2 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC15.62■□□□□ 0.09
Cchcr1Q8K2I2 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cchcr1Q8K2I2 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cchcr1Q8K2I2 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
Cchcr1Q8K2I2 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cchcr1Q8K2I2 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cchcr1Q8K2I2 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cchcr1Q8K2I2 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC15.61■□□□□ 0.09
Cchcr1Q8K2I2 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Cchcr1Q8K2I2 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC15.61■□□□□ 0.09
Cchcr1Q8K2I2 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Cchcr1Q8K2I2 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Cchcr1Q8K2I2 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cchcr1Q8K2I2 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC15.61■□□□□ 0.09
Cchcr1Q8K2I2 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cchcr1Q8K2I2 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cchcr1Q8K2I2 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC15.61■□□□□ 0.09
Cchcr1Q8K2I2 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cchcr1Q8K2I2 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cchcr1Q8K2I2 Gm42612-201ENSMUST00000197986 623 ntBASIC15.61■□□□□ 0.09
Cchcr1Q8K2I2 Gm43170-201ENSMUST00000199827 612 ntBASIC15.61■□□□□ 0.09
Cchcr1Q8K2I2 Gm20949-201ENSMUST00000206478 952 ntBASIC15.61■□□□□ 0.09
Cchcr1Q8K2I2 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC15.61■□□□□ 0.09
Cchcr1Q8K2I2 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC15.61■□□□□ 0.09
Cchcr1Q8K2I2 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC15.61■□□□□ 0.09
Cchcr1Q8K2I2 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cchcr1Q8K2I2 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cchcr1Q8K2I2 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cchcr1Q8K2I2 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cchcr1Q8K2I2 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cchcr1Q8K2I2 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC15.61■□□□□ 0.09
Cchcr1Q8K2I2 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cchcr1Q8K2I2 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Cchcr1Q8K2I2 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cchcr1Q8K2I2 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cchcr1Q8K2I2 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cchcr1Q8K2I2 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cchcr1Q8K2I2 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Cchcr1Q8K2I2 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cchcr1Q8K2I2 Gm9755-201ENSMUST00000032981 1356 ntBASIC15.61■□□□□ 0.09
Cchcr1Q8K2I2 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cchcr1Q8K2I2 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cchcr1Q8K2I2 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Cchcr1Q8K2I2 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cchcr1Q8K2I2 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cchcr1Q8K2I2 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Cchcr1Q8K2I2 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cchcr1Q8K2I2 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC15.6■□□□□ 0.09
Cchcr1Q8K2I2 AC154527.2-201ENSMUST00000225256 1466 ntBASIC15.6■□□□□ 0.09
Cchcr1Q8K2I2 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cchcr1Q8K2I2 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cchcr1Q8K2I2 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC15.6■□□□□ 0.09
Cchcr1Q8K2I2 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cchcr1Q8K2I2 Ldha-ps-201ENSMUST00000119390 995 ntBASIC15.6■□□□□ 0.09
Cchcr1Q8K2I2 Gm14057-201ENSMUST00000120631 482 ntBASIC15.6■□□□□ 0.09
Cchcr1Q8K2I2 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.6■□□□□ 0.09
Cchcr1Q8K2I2 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cchcr1Q8K2I2 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.6■□□□□ 0.09
Cchcr1Q8K2I2 Gm7730-201ENSMUST00000212486 454 ntBASIC15.6■□□□□ 0.09
Cchcr1Q8K2I2 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC15.6■□□□□ 0.09
Cchcr1Q8K2I2 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms