Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip4Q8CI96 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Clip4Q8CI96 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip4Q8CI96 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.32□□□□□ -0.28
Clip4Q8CI96 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip4Q8CI96 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.32□□□□□ -0.28
Clip4Q8CI96 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
Clip4Q8CI96 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip4Q8CI96 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.32□□□□□ -0.28
Clip4Q8CI96 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Clip4Q8CI96 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Clip4Q8CI96 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip4Q8CI96 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Clip4Q8CI96 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip4Q8CI96 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip4Q8CI96 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip4Q8CI96 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip4Q8CI96 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clip4Q8CI96 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clip4Q8CI96 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clip4Q8CI96 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clip4Q8CI96 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clip4Q8CI96 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Clip4Q8CI96 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clip4Q8CI96 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clip4Q8CI96 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
Clip4Q8CI96 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clip4Q8CI96 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clip4Q8CI96 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Clip4Q8CI96 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clip4Q8CI96 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Clip4Q8CI96 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Clip4Q8CI96 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Clip4Q8CI96 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Clip4Q8CI96 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Clip4Q8CI96 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clip4Q8CI96 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.31□□□□□ -0.28
Clip4Q8CI96 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Clip4Q8CI96 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clip4Q8CI96 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.31□□□□□ -0.28
Clip4Q8CI96 Mir7654-201ENSMUST00000185082 70 ntBASIC13.31□□□□□ -0.28
Clip4Q8CI96 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Clip4Q8CI96 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Clip4Q8CI96 Gm19078-201ENSMUST00000206311 727 ntBASIC13.31□□□□□ -0.28
Clip4Q8CI96 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Clip4Q8CI96 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clip4Q8CI96 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clip4Q8CI96 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Clip4Q8CI96 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clip4Q8CI96 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clip4Q8CI96 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clip4Q8CI96 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clip4Q8CI96 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Clip4Q8CI96 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clip4Q8CI96 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clip4Q8CI96 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clip4Q8CI96 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clip4Q8CI96 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Clip4Q8CI96 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clip4Q8CI96 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.3□□□□□ -0.28
Clip4Q8CI96 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.3□□□□□ -0.28
Clip4Q8CI96 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clip4Q8CI96 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Clip4Q8CI96 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clip4Q8CI96 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Clip4Q8CI96 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clip4Q8CI96 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clip4Q8CI96 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clip4Q8CI96 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Clip4Q8CI96 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Clip4Q8CI96 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.3□□□□□ -0.28
Clip4Q8CI96 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clip4Q8CI96 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Clip4Q8CI96 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Clip4Q8CI96 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clip4Q8CI96 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Clip4Q8CI96 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clip4Q8CI96 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Clip4Q8CI96 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clip4Q8CI96 Gm11524-201ENSMUST00000119349 807 ntBASIC13.3□□□□□ -0.28
Clip4Q8CI96 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clip4Q8CI96 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Clip4Q8CI96 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clip4Q8CI96 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clip4Q8CI96 Gm18307-201ENSMUST00000206864 949 ntBASIC13.3□□□□□ -0.28
Clip4Q8CI96 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.3□□□□□ -0.28
Clip4Q8CI96 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clip4Q8CI96 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.3□□□□□ -0.28
Clip4Q8CI96 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clip4Q8CI96 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clip4Q8CI96 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.3□□□□□ -0.28
Clip4Q8CI96 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clip4Q8CI96 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clip4Q8CI96 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clip4Q8CI96 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clip4Q8CI96 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clip4Q8CI96 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clip4Q8CI96 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clip4Q8CI96 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clip4Q8CI96 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms