Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Usp44Q8C2S0 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Usp44Q8C2S0 Gm43570-201ENSMUST00000199951 3688 ntBASIC15.42■□□□□ 0.06
Usp44Q8C2S0 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp44Q8C2S0 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC15.42■□□□□ 0.06
Usp44Q8C2S0 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Usp44Q8C2S0 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp44Q8C2S0 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp44Q8C2S0 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp44Q8C2S0 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
Usp44Q8C2S0 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Usp44Q8C2S0 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15.42■□□□□ 0.06
Usp44Q8C2S0 Gm24644-201ENSMUST00000157114 139 ntBASIC15.42■□□□□ 0.06
Usp44Q8C2S0 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Usp44Q8C2S0 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC15.42■□□□□ 0.06
Usp44Q8C2S0 Gm5745-201ENSMUST00000183748 313 ntBASIC15.42■□□□□ 0.06
Usp44Q8C2S0 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC15.42■□□□□ 0.06
Usp44Q8C2S0 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp44Q8C2S0 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp44Q8C2S0 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
Usp44Q8C2S0 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Usp44Q8C2S0 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Usp44Q8C2S0 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC15.42■□□□□ 0.06
Usp44Q8C2S0 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp44Q8C2S0 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp44Q8C2S0 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Usp44Q8C2S0 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Usp44Q8C2S0 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC15.42■□□□□ 0.06
Usp44Q8C2S0 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp44Q8C2S0 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Usp44Q8C2S0 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp44Q8C2S0 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp44Q8C2S0 Gm14608-201ENSMUST00000120030 1553 ntBASIC15.41■□□□□ 0.06
Usp44Q8C2S0 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp44Q8C2S0 Gm8131-201ENSMUST00000213783 1570 ntBASIC15.41■□□□□ 0.06
Usp44Q8C2S0 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp44Q8C2S0 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp44Q8C2S0 Gm45643-201ENSMUST00000211364 1484 ntBASIC15.41■□□□□ 0.06
Usp44Q8C2S0 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC15.41■□□□□ 0.06
Usp44Q8C2S0 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Usp44Q8C2S0 Gm38049-201ENSMUST00000195698 1372 ntBASIC15.41■□□□□ 0.06
Usp44Q8C2S0 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp44Q8C2S0 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Usp44Q8C2S0 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
Usp44Q8C2S0 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC15.41■□□□□ 0.06
Usp44Q8C2S0 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Usp44Q8C2S0 Gm17150-201ENSMUST00000165577 381 ntBASIC15.41■□□□□ 0.06
Usp44Q8C2S0 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC15.41■□□□□ 0.06
Usp44Q8C2S0 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC15.41■□□□□ 0.06
Usp44Q8C2S0 Gm6458-201ENSMUST00000211573 635 ntBASIC15.41■□□□□ 0.06
Usp44Q8C2S0 Gm29705-201ENSMUST00000212598 474 ntBASIC15.41■□□□□ 0.06
Usp44Q8C2S0 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC15.41■□□□□ 0.06
Usp44Q8C2S0 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Usp44Q8C2S0 AC130829.1-201ENSMUST00000221548 494 ntBASIC15.41■□□□□ 0.06
Usp44Q8C2S0 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp44Q8C2S0 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Usp44Q8C2S0 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Usp44Q8C2S0 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp44Q8C2S0 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp44Q8C2S0 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp44Q8C2S0 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Usp44Q8C2S0 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp44Q8C2S0 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC15.41■□□□□ 0.06
Usp44Q8C2S0 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Usp44Q8C2S0 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Usp44Q8C2S0 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp44Q8C2S0 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Usp44Q8C2S0 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp44Q8C2S0 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp44Q8C2S0 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Usp44Q8C2S0 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Usp44Q8C2S0 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp44Q8C2S0 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp44Q8C2S0 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Usp44Q8C2S0 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp44Q8C2S0 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC15.4■□□□□ 0.06
Usp44Q8C2S0 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp44Q8C2S0 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp44Q8C2S0 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp44Q8C2S0 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Usp44Q8C2S0 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Usp44Q8C2S0 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp44Q8C2S0 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
Usp44Q8C2S0 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp44Q8C2S0 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp44Q8C2S0 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC15.4■□□□□ 0.06
Usp44Q8C2S0 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC15.4■□□□□ 0.06
Usp44Q8C2S0 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp44Q8C2S0 Gm29127-201ENSMUST00000188304 517 ntBASIC15.4■□□□□ 0.06
Usp44Q8C2S0 Gm44799-201ENSMUST00000207639 1202 ntBASIC15.4■□□□□ 0.06
Usp44Q8C2S0 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC15.4■□□□□ 0.06
Usp44Q8C2S0 AC166051.1-201ENSMUST00000214313 210 ntBASIC15.4■□□□□ 0.06
Usp44Q8C2S0 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp44Q8C2S0 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp44Q8C2S0 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Usp44Q8C2S0 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp44Q8C2S0 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp44Q8C2S0 Gm38577-201ENSMUST00000221531 4545 ntBASIC15.4■□□□□ 0.06
Usp44Q8C2S0 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp44Q8C2S0 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms