Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Scfd1Q8BRF7 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scfd1Q8BRF7 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scfd1Q8BRF7 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC15.02■□□□□ -0
Scfd1Q8BRF7 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scfd1Q8BRF7 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC15.02■□□□□ -0
Scfd1Q8BRF7 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Scfd1Q8BRF7 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Scfd1Q8BRF7 Gm3756-201ENSMUST00000169182 1355 ntBASIC15.02■□□□□ -0
Scfd1Q8BRF7 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC15.02■□□□□ -0
Scfd1Q8BRF7 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.02■□□□□ -0
Scfd1Q8BRF7 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scfd1Q8BRF7 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Scfd1Q8BRF7 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC15.02■□□□□ -0
Scfd1Q8BRF7 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scfd1Q8BRF7 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC15.02■□□□□ -0
Scfd1Q8BRF7 Gm13350-201ENSMUST00000120519 479 ntBASIC15.02■□□□□ -0
Scfd1Q8BRF7 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC15.02■□□□□ -0
Scfd1Q8BRF7 Gm5637-201ENSMUST00000153890 1119 ntBASIC15.02■□□□□ -0
Scfd1Q8BRF7 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scfd1Q8BRF7 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Scfd1Q8BRF7 Gm37489-201ENSMUST00000191883 159 ntBASIC15.02■□□□□ -0
Scfd1Q8BRF7 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC15.02■□□□□ -0
Scfd1Q8BRF7 Gm45865-201ENSMUST00000211815 945 ntBASIC15.02■□□□□ -0
Scfd1Q8BRF7 AC166051.1-201ENSMUST00000214313 210 ntBASIC15.02■□□□□ -0
Scfd1Q8BRF7 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC15.02■□□□□ -0
Scfd1Q8BRF7 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scfd1Q8BRF7 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC15.02■□□□□ -0
Scfd1Q8BRF7 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC15.02■□□□□ -0
Scfd1Q8BRF7 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Scfd1Q8BRF7 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scfd1Q8BRF7 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Scfd1Q8BRF7 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scfd1Q8BRF7 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scfd1Q8BRF7 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scfd1Q8BRF7 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scfd1Q8BRF7 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Scfd1Q8BRF7 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scfd1Q8BRF7 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scfd1Q8BRF7 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scfd1Q8BRF7 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Gm4986-201ENSMUST00000119731 549 ntBASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Gm14704-201ENSMUST00000120300 874 ntBASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Gm7584-201ENSMUST00000175829 940 ntBASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Gm38341-201ENSMUST00000195357 515 ntBASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Gm43416-201ENSMUST00000201916 1015 ntBASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Gm44775-201ENSMUST00000207266 1456 ntBASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Scfd1Q8BRF7 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC15□□□□□ -0.01
Scfd1Q8BRF7 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scfd1Q8BRF7 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Scfd1Q8BRF7 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scfd1Q8BRF7 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms