Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Gm5523-201ENSMUST00000180415 997 ntBASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Gm28450-201ENSMUST00000187349 638 ntBASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.93□□□□□ -0.02
Ddx55Q6ZPL9 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Gm23200-201ENSMUST00000104379 132 ntBASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Gm9083-201ENSMUST00000120423 819 ntBASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Gm12201-201ENSMUST00000120657 1234 ntBASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Gm8856-201ENSMUST00000185254 1144 ntBASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 AC123665.1-201ENSMUST00000228204 438 ntBASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Gm8385-201ENSMUST00000058999 643 ntBASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ddx55Q6ZPL9 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx55Q6ZPL9 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx55Q6ZPL9 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx55Q6ZPL9 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx55Q6ZPL9 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx55Q6ZPL9 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx55Q6ZPL9 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx55Q6ZPL9 Gm43908-201ENSMUST00000205074 1472 ntBASIC14.91□□□□□ -0.02
Ddx55Q6ZPL9 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx55Q6ZPL9 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx55Q6ZPL9 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms