Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 AC135469.1-201ENSMUST00000225984 772 ntBASIC19.95■□□□□ 0.78
Slx4Q6P1D7 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slx4Q6P1D7 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slx4Q6P1D7 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slx4Q6P1D7 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Slx4Q6P1D7 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slx4Q6P1D7 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slx4Q6P1D7 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Slx4Q6P1D7 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slx4Q6P1D7 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slx4Q6P1D7 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slx4Q6P1D7 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slx4Q6P1D7 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slx4Q6P1D7 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC19.94■□□□□ 0.78
Slx4Q6P1D7 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Slx4Q6P1D7 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slx4Q6P1D7 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slx4Q6P1D7 Gm4993-201ENSMUST00000118719 1174 ntBASIC19.94■□□□□ 0.78
Slx4Q6P1D7 Gm14665-201ENSMUST00000122294 557 ntBASIC19.94■□□□□ 0.78
Slx4Q6P1D7 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC19.94■□□□□ 0.78
Slx4Q6P1D7 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slx4Q6P1D7 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Slx4Q6P1D7 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC19.94■□□□□ 0.78
Slx4Q6P1D7 AC165260.3-202ENSMUST00000224550 1031 ntBASIC19.94■□□□□ 0.78
Slx4Q6P1D7 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slx4Q6P1D7 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Slx4Q6P1D7 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slx4Q6P1D7 AC159308.2-201ENSMUST00000213592 2325 ntBASIC19.94■□□□□ 0.78
Slx4Q6P1D7 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC19.94■□□□□ 0.78
Slx4Q6P1D7 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slx4Q6P1D7 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
Slx4Q6P1D7 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slx4Q6P1D7 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC19.93■□□□□ 0.78
Slx4Q6P1D7 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slx4Q6P1D7 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC19.93■□□□□ 0.78
Slx4Q6P1D7 Gm6039-201ENSMUST00000121667 1250 ntBASIC19.93■□□□□ 0.78
Slx4Q6P1D7 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC19.93■□□□□ 0.78
Slx4Q6P1D7 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
Slx4Q6P1D7 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC19.93■□□□□ 0.78
Slx4Q6P1D7 Mir6958-201ENSMUST00000184207 73 ntBASIC19.93■□□□□ 0.78
Slx4Q6P1D7 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slx4Q6P1D7 Aprt-ps-201ENSMUST00000212311 505 ntBASIC19.93■□□□□ 0.78
Slx4Q6P1D7 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC19.93■□□□□ 0.78
Slx4Q6P1D7 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Slx4Q6P1D7 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slx4Q6P1D7 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Slx4Q6P1D7 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Slx4Q6P1D7 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slx4Q6P1D7 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Slx4Q6P1D7 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slx4Q6P1D7 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slx4Q6P1D7 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC19.92■□□□□ 0.78
Slx4Q6P1D7 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Slx4Q6P1D7 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC19.92■□□□□ 0.78
Slx4Q6P1D7 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC19.92■□□□□ 0.78
Slx4Q6P1D7 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC19.92■□□□□ 0.78
Slx4Q6P1D7 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slx4Q6P1D7 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Slx4Q6P1D7 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slx4Q6P1D7 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slx4Q6P1D7 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slx4Q6P1D7 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slx4Q6P1D7 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slx4Q6P1D7 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slx4Q6P1D7 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slx4Q6P1D7 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC19.92■□□□□ 0.78
Slx4Q6P1D7 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slx4Q6P1D7 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slx4Q6P1D7 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slx4Q6P1D7 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slx4Q6P1D7 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC19.91■□□□□ 0.78
Slx4Q6P1D7 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC19.91■□□□□ 0.78
Slx4Q6P1D7 Gm11941-201ENSMUST00000119904 610 ntBASIC19.91■□□□□ 0.78
Slx4Q6P1D7 Gm6407-201ENSMUST00000176468 549 ntBASIC19.91■□□□□ 0.78
Slx4Q6P1D7 Gm7600-201ENSMUST00000209657 785 ntBASIC19.91■□□□□ 0.78
Slx4Q6P1D7 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC19.91■□□□□ 0.78
Slx4Q6P1D7 Gm45242-201ENSMUST00000210666 2129 ntBASIC19.91■□□□□ 0.78
Slx4Q6P1D7 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Slx4Q6P1D7 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slx4Q6P1D7 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Slx4Q6P1D7 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slx4Q6P1D7 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Slx4Q6P1D7 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slx4Q6P1D7 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC19.91■□□□□ 0.78
Slx4Q6P1D7 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slx4Q6P1D7 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC19.91■□□□□ 0.78
Slx4Q6P1D7 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slx4Q6P1D7 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Slx4Q6P1D7 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC19.91■□□□□ 0.78
Slx4Q6P1D7 Gm37912-201ENSMUST00000191895 3076 ntBASIC19.91■□□□□ 0.78
Slx4Q6P1D7 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slx4Q6P1D7 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Slx4Q6P1D7 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slx4Q6P1D7 Gm23949-201ENSMUST00000104027 127 ntBASIC19.91■□□□□ 0.78
Slx4Q6P1D7 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Slx4Q6P1D7 Gm13035-201ENSMUST00000117496 342 ntBASIC19.91■□□□□ 0.78
Slx4Q6P1D7 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC19.91■□□□□ 0.78
Slx4Q6P1D7 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Slx4Q6P1D7 AY036118-201ENSMUST00000200021 923 ntBASIC19.91■□□□□ 0.78
Slx4Q6P1D7 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms