Protein–RNA interactions for Protein: Q62141

Sin3b, Paired amphipathic helix protein Sin3b, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sin3bQ62141 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sin3bQ62141 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Sin3bQ62141 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.05□□□□□ -0.16
Sin3bQ62141 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sin3bQ62141 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sin3bQ62141 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Sin3bQ62141 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sin3bQ62141 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sin3bQ62141 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Sin3bQ62141 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Sin3bQ62141 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sin3bQ62141 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sin3bQ62141 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sin3bQ62141 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sin3bQ62141 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sin3bQ62141 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sin3bQ62141 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sin3bQ62141 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sin3bQ62141 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sin3bQ62141 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sin3bQ62141 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Sin3bQ62141 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.04□□□□□ -0.16
Sin3bQ62141 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.04□□□□□ -0.16
Sin3bQ62141 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Sin3bQ62141 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sin3bQ62141 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sin3bQ62141 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sin3bQ62141 Gm26616-202ENSMUST00000195676 3107 ntBASIC14.04□□□□□ -0.16
Sin3bQ62141 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sin3bQ62141 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.04□□□□□ -0.16
Sin3bQ62141 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sin3bQ62141 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sin3bQ62141 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sin3bQ62141 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sin3bQ62141 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sin3bQ62141 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sin3bQ62141 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.04□□□□□ -0.16
Sin3bQ62141 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sin3bQ62141 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sin3bQ62141 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sin3bQ62141 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sin3bQ62141 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sin3bQ62141 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sin3bQ62141 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sin3bQ62141 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sin3bQ62141 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Sin3bQ62141 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sin3bQ62141 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sin3bQ62141 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sin3bQ62141 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sin3bQ62141 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sin3bQ62141 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sin3bQ62141 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sin3bQ62141 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sin3bQ62141 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.03□□□□□ -0.16
Sin3bQ62141 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Sin3bQ62141 Gm11524-201ENSMUST00000119349 807 ntBASIC14.03□□□□□ -0.16
Sin3bQ62141 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.03□□□□□ -0.16
Sin3bQ62141 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Sin3bQ62141 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sin3bQ62141 Mir6977-201ENSMUST00000184960 64 ntBASIC14.03□□□□□ -0.16
Sin3bQ62141 Gm28760-201ENSMUST00000185995 736 ntBASIC14.03□□□□□ -0.16
Sin3bQ62141 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sin3bQ62141 Gm29608-201ENSMUST00000190444 463 ntBASIC14.03□□□□□ -0.16
Sin3bQ62141 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Sin3bQ62141 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sin3bQ62141 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.03□□□□□ -0.16
Sin3bQ62141 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.03□□□□□ -0.16
Sin3bQ62141 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sin3bQ62141 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sin3bQ62141 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.03□□□□□ -0.16
Sin3bQ62141 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sin3bQ62141 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sin3bQ62141 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sin3bQ62141 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sin3bQ62141 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
Sin3bQ62141 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sin3bQ62141 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sin3bQ62141 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sin3bQ62141 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Sin3bQ62141 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sin3bQ62141 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sin3bQ62141 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sin3bQ62141 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.02□□□□□ -0.16
Sin3bQ62141 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Sin3bQ62141 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.02□□□□□ -0.16
Sin3bQ62141 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sin3bQ62141 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sin3bQ62141 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sin3bQ62141 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.02□□□□□ -0.16
Sin3bQ62141 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sin3bQ62141 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sin3bQ62141 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sin3bQ62141 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.02□□□□□ -0.16
Sin3bQ62141 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sin3bQ62141 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sin3bQ62141 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Sin3bQ62141 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sin3bQ62141 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Sin3bQ62141 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms