Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm13740-201ENSMUST00000120590 310 ntBASIC9.9□□□□□ -0.82
Foxc1Q61572 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC9.9□□□□□ -0.82
Foxc1Q61572 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC9.9□□□□□ -0.82
Foxc1Q61572 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Foxc1Q61572 Gm21854-201ENSMUST00000179901 471 ntBASIC9.9□□□□□ -0.82
Foxc1Q61572 Gm28760-201ENSMUST00000185995 736 ntBASIC9.9□□□□□ -0.82
Foxc1Q61572 Gm32999-201ENSMUST00000192693 562 ntBASIC9.9□□□□□ -0.82
Foxc1Q61572 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC9.9□□□□□ -0.82
Foxc1Q61572 Gm18018-201ENSMUST00000198273 408 ntBASIC9.9□□□□□ -0.82
Foxc1Q61572 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Foxc1Q61572 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC9.9□□□□□ -0.82
Foxc1Q61572 Gm44421-201ENSMUST00000205064 1221 ntBASIC9.9□□□□□ -0.82
Foxc1Q61572 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Foxc1Q61572 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC9.9□□□□□ -0.82
Foxc1Q61572 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC9.9□□□□□ -0.82
Foxc1Q61572 AC166997.1-201ENSMUST00000225122 572 ntBASIC9.9□□□□□ -0.82
Foxc1Q61572 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Foxc1Q61572 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Foxc1Q61572 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Foxc1Q61572 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Foxc1Q61572 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Foxc1Q61572 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Foxc1Q61572 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Foxc1Q61572 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Foxc1Q61572 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Foxc1Q61572 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
Foxc1Q61572 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Foxc1Q61572 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Foxc1Q61572 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Foxc1Q61572 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Foxc1Q61572 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Foxc1Q61572 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Foxc1Q61572 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Foxc1Q61572 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Foxc1Q61572 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Foxc1Q61572 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Foxc1Q61572 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Foxc1Q61572 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC9.9□□□□□ -0.83
Foxc1Q61572 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Foxc1Q61572 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Foxc1Q61572 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Foxc1Q61572 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Foxc1Q61572 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Foxc1Q61572 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Foxc1Q61572 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Foxc1Q61572 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Foxc1Q61572 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.83
Foxc1Q61572 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Foxc1Q61572 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Foxc1Q61572 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC9.89□□□□□ -0.83
Foxc1Q61572 Clec12b-202ENSMUST00000112082 1335 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Foxc1Q61572 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Foxc1Q61572 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Foxc1Q61572 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Foxc1Q61572 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Foxc1Q61572 Paupar-201ENSMUST00000194826 3482 ntBASIC9.89□□□□□ -0.83
Foxc1Q61572 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Foxc1Q61572 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC9.89□□□□□ -0.83
Foxc1Q61572 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.83
Foxc1Q61572 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Foxc1Q61572 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Foxc1Q61572 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Foxc1Q61572 Dcpp3-201ENSMUST00000115428 610 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Foxc1Q61572 Gm6912-201ENSMUST00000117218 544 ntBASIC9.89□□□□□ -0.83
Foxc1Q61572 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Foxc1Q61572 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC9.89□□□□□ -0.83
Foxc1Q61572 Gm16044-201ENSMUST00000118475 450 ntBASIC9.89□□□□□ -0.83
Foxc1Q61572 Gm6461-201ENSMUST00000120015 633 ntBASIC9.89□□□□□ -0.83
Foxc1Q61572 Gm15225-201ENSMUST00000120449 1017 ntBASIC9.89□□□□□ -0.83
Foxc1Q61572 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Foxc1Q61572 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC9.89□□□□□ -0.83
Foxc1Q61572 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC9.89□□□□□ -0.83
Foxc1Q61572 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Foxc1Q61572 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Foxc1Q61572 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Foxc1Q61572 Gm37517-201ENSMUST00000194004 1289 ntBASIC9.89□□□□□ -0.83
Foxc1Q61572 Gm42612-201ENSMUST00000197986 623 ntBASIC9.89□□□□□ -0.83
Foxc1Q61572 Gm43170-201ENSMUST00000199827 612 ntBASIC9.89□□□□□ -0.83
Foxc1Q61572 Gm5149-202ENSMUST00000199980 1250 ntTSL 2 BASIC9.89□□□□□ -0.83
Foxc1Q61572 Gm18871-201ENSMUST00000218655 745 ntBASIC9.89□□□□□ -0.83
Foxc1Q61572 AC132384.6-201ENSMUST00000218976 1206 ntBASIC9.89□□□□□ -0.83
Foxc1Q61572 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Foxc1Q61572 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Foxc1Q61572 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Foxc1Q61572 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Foxc1Q61572 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC9.89□□□□□ -0.83
Foxc1Q61572 Gm9797-201ENSMUST00000052902 613 ntBASIC9.89□□□□□ -0.83
Foxc1Q61572 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Foxc1Q61572 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Foxc1Q61572 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Foxc1Q61572 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Foxc1Q61572 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Foxc1Q61572 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC9.89□□□□□ -0.83
Foxc1Q61572 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Foxc1Q61572 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Foxc1Q61572 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Foxc1Q61572 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Foxc1Q61572 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Foxc1Q61572 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Foxc1Q61572 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms