Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx2Q61412 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx2Q61412 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx2Q61412 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Vsx2Q61412 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vsx2Q61412 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Vsx2Q61412 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx2Q61412 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx2Q61412 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx2Q61412 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx2Q61412 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Vsx2Q61412 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx2Q61412 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx2Q61412 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.88□□□□□ -0.35
Vsx2Q61412 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Vsx2Q61412 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx2Q61412 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx2Q61412 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx2Q61412 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.88□□□□□ -0.35
Vsx2Q61412 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx2Q61412 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.88□□□□□ -0.35
Vsx2Q61412 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.88□□□□□ -0.35
Vsx2Q61412 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.88□□□□□ -0.35
Vsx2Q61412 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx2Q61412 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx2Q61412 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.88□□□□□ -0.35
Vsx2Q61412 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Vsx2Q61412 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx2Q61412 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx2Q61412 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx2Q61412 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx2Q61412 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Vsx2Q61412 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx2Q61412 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx2Q61412 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx2Q61412 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx2Q61412 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx2Q61412 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.88□□□□□ -0.35
Vsx2Q61412 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx2Q61412 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx2Q61412 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Vsx2Q61412 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx2Q61412 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx2Q61412 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx2Q61412 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx2Q61412 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx2Q61412 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.87□□□□□ -0.35
Vsx2Q61412 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.87□□□□□ -0.35
Vsx2Q61412 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.87□□□□□ -0.35
Vsx2Q61412 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Vsx2Q61412 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Vsx2Q61412 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Vsx2Q61412 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.87□□□□□ -0.35
Vsx2Q61412 Gm42550-201ENSMUST00000201553 960 ntBASIC12.87□□□□□ -0.35
Vsx2Q61412 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx2Q61412 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.87□□□□□ -0.35
Vsx2Q61412 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx2Q61412 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx2Q61412 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx2Q61412 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx2Q61412 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx2Q61412 Gm24447-201ENSMUST00000083977 338 ntBASIC12.87□□□□□ -0.35
Vsx2Q61412 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx2Q61412 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Vsx2Q61412 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.87□□□□□ -0.35
Vsx2Q61412 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx2Q61412 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx2Q61412 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx2Q61412 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Vsx2Q61412 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx2Q61412 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx2Q61412 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx2Q61412 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx2Q61412 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx2Q61412 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx2Q61412 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx2Q61412 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Vsx2Q61412 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx2Q61412 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx2Q61412 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx2Q61412 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx2Q61412 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Vsx2Q61412 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vsx2Q61412 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vsx2Q61412 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.86□□□□□ -0.35
Vsx2Q61412 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vsx2Q61412 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Vsx2Q61412 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vsx2Q61412 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Vsx2Q61412 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vsx2Q61412 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vsx2Q61412 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vsx2Q61412 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vsx2Q61412 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.86□□□□□ -0.35
Vsx2Q61412 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vsx2Q61412 Gm15371-201ENSMUST00000117057 784 ntBASIC12.86□□□□□ -0.35
Vsx2Q61412 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vsx2Q61412 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vsx2Q61412 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.86□□□□□ -0.35
Vsx2Q61412 Gm38223-201ENSMUST00000194484 695 ntBASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms