Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav5d-4Q5R1F6 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Gm13689-201ENSMUST00000119360 685 ntBASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Gm12341-201ENSMUST00000119724 503 ntBASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Gm28631-201ENSMUST00000190740 334 ntBASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav5d-4Q5R1F6 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Gm27437-201ENSMUST00000183429 107 ntBASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms