Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps13aQ5H8C4 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps13aQ5H8C4 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps13aQ5H8C4 Gm15573-201ENSMUST00000119487 540 ntBASIC12.74□□□□□ -0.37
Vps13aQ5H8C4 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.74□□□□□ -0.37
Vps13aQ5H8C4 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps13aQ5H8C4 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps13aQ5H8C4 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps13aQ5H8C4 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps13aQ5H8C4 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps13aQ5H8C4 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Vps13aQ5H8C4 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps13aQ5H8C4 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps13aQ5H8C4 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps13aQ5H8C4 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.74□□□□□ -0.37
Vps13aQ5H8C4 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps13aQ5H8C4 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.74□□□□□ -0.37
Vps13aQ5H8C4 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.74□□□□□ -0.37
Vps13aQ5H8C4 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.74□□□□□ -0.37
Vps13aQ5H8C4 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps13aQ5H8C4 Gm27627-201ENSMUST00000183644 150 ntBASIC12.74□□□□□ -0.37
Vps13aQ5H8C4 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC12.74□□□□□ -0.37
Vps13aQ5H8C4 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.74□□□□□ -0.37
Vps13aQ5H8C4 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.74□□□□□ -0.37
Vps13aQ5H8C4 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.74□□□□□ -0.37
Vps13aQ5H8C4 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps13aQ5H8C4 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps13aQ5H8C4 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps13aQ5H8C4 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vps13aQ5H8C4 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.74□□□□□ -0.37
Vps13aQ5H8C4 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps13aQ5H8C4 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC12.74□□□□□ -0.37
Vps13aQ5H8C4 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.74□□□□□ -0.37
Vps13aQ5H8C4 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vps13aQ5H8C4 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps13aQ5H8C4 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Vps13aQ5H8C4 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps13aQ5H8C4 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps13aQ5H8C4 Gm18038-201ENSMUST00000197900 485 ntBASIC12.73□□□□□ -0.37
Vps13aQ5H8C4 Gm45598-202ENSMUST00000210719 986 ntBASIC12.73□□□□□ -0.37
Vps13aQ5H8C4 CT025602.2-201ENSMUST00000226553 772 ntBASIC12.73□□□□□ -0.37
Vps13aQ5H8C4 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps13aQ5H8C4 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps13aQ5H8C4 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps13aQ5H8C4 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps13aQ5H8C4 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.73□□□□□ -0.37
Vps13aQ5H8C4 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps13aQ5H8C4 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC12.73□□□□□ -0.37
Vps13aQ5H8C4 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Vps13aQ5H8C4 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps13aQ5H8C4 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps13aQ5H8C4 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps13aQ5H8C4 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.73□□□□□ -0.37
Vps13aQ5H8C4 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps13aQ5H8C4 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Vps13aQ5H8C4 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps13aQ5H8C4 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps13aQ5H8C4 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps13aQ5H8C4 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vps13aQ5H8C4 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps13aQ5H8C4 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.73□□□□□ -0.37
Vps13aQ5H8C4 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps13aQ5H8C4 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Vps13aQ5H8C4 Gm11451-201ENSMUST00000118946 630 ntBASIC12.73□□□□□ -0.37
Vps13aQ5H8C4 Gm12990-201ENSMUST00000120372 468 ntBASIC12.73□□□□□ -0.37
Vps13aQ5H8C4 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.73□□□□□ -0.37
Vps13aQ5H8C4 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vps13aQ5H8C4 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.72□□□□□ -0.37
Vps13aQ5H8C4 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps13aQ5H8C4 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps13aQ5H8C4 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps13aQ5H8C4 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Vps13aQ5H8C4 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps13aQ5H8C4 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Vps13aQ5H8C4 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps13aQ5H8C4 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Vps13aQ5H8C4 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Vps13aQ5H8C4 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Vps13aQ5H8C4 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Vps13aQ5H8C4 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps13aQ5H8C4 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps13aQ5H8C4 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps13aQ5H8C4 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps13aQ5H8C4 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps13aQ5H8C4 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps13aQ5H8C4 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps13aQ5H8C4 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps13aQ5H8C4 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps13aQ5H8C4 Gm28882-201ENSMUST00000185504 314 ntBASIC12.72□□□□□ -0.37
Vps13aQ5H8C4 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Vps13aQ5H8C4 Gm10774-201ENSMUST00000188689 204 ntBASIC12.72□□□□□ -0.37
Vps13aQ5H8C4 Gm28071-201ENSMUST00000190355 478 ntBASIC12.72□□□□□ -0.37
Vps13aQ5H8C4 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Vps13aQ5H8C4 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps13aQ5H8C4 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps13aQ5H8C4 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps13aQ5H8C4 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Vps13aQ5H8C4 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Vps13aQ5H8C4 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps13aQ5H8C4 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms