Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp48Q3V0C5 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Usp48Q3V0C5 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp48Q3V0C5 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Usp48Q3V0C5 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp48Q3V0C5 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Usp48Q3V0C5 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp48Q3V0C5 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Usp48Q3V0C5 Gm13297-201ENSMUST00000120205 934 ntBASIC16.34■□□□□ 0.21
Usp48Q3V0C5 Gm20482-202ENSMUST00000174729 825 ntBASIC16.34■□□□□ 0.21
Usp48Q3V0C5 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC16.34■□□□□ 0.21
Usp48Q3V0C5 AC131690.1-201ENSMUST00000218406 374 ntBASIC16.34■□□□□ 0.21
Usp48Q3V0C5 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp48Q3V0C5 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp48Q3V0C5 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp48Q3V0C5 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Usp48Q3V0C5 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp48Q3V0C5 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Usp48Q3V0C5 Grk6-205ENSMUST00000224653 2976 ntBASIC16.34■□□□□ 0.21
Usp48Q3V0C5 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Usp48Q3V0C5 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Usp48Q3V0C5 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Usp48Q3V0C5 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Usp48Q3V0C5 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC16.33■□□□□ 0.21
Usp48Q3V0C5 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp48Q3V0C5 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Usp48Q3V0C5 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Usp48Q3V0C5 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC16.33■□□□□ 0.2
Usp48Q3V0C5 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Usp48Q3V0C5 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC16.33■□□□□ 0.2
Usp48Q3V0C5 Gm16379-201ENSMUST00000161469 348 ntBASIC16.33■□□□□ 0.2
Usp48Q3V0C5 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC16.33■□□□□ 0.2
Usp48Q3V0C5 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp48Q3V0C5 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Usp48Q3V0C5 Gm37489-201ENSMUST00000191883 159 ntBASIC16.33■□□□□ 0.2
Usp48Q3V0C5 Gm8762-201ENSMUST00000193486 339 ntBASIC16.33■□□□□ 0.2
Usp48Q3V0C5 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC16.33■□□□□ 0.2
Usp48Q3V0C5 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Usp48Q3V0C5 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp48Q3V0C5 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp48Q3V0C5 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Usp48Q3V0C5 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Usp48Q3V0C5 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Usp48Q3V0C5 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp48Q3V0C5 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Usp48Q3V0C5 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Usp48Q3V0C5 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Usp48Q3V0C5 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Usp48Q3V0C5 AC153366.2-201ENSMUST00000219461 1984 ntBASIC16.33■□□□□ 0.2
Usp48Q3V0C5 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Usp48Q3V0C5 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Usp48Q3V0C5 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp48Q3V0C5 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp48Q3V0C5 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp48Q3V0C5 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp48Q3V0C5 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC16.32■□□□□ 0.2
Usp48Q3V0C5 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Usp48Q3V0C5 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp48Q3V0C5 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC16.32■□□□□ 0.2
Usp48Q3V0C5 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Usp48Q3V0C5 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC16.32■□□□□ 0.2
Usp48Q3V0C5 Gm7029-201ENSMUST00000173226 450 ntBASIC16.32■□□□□ 0.2
Usp48Q3V0C5 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Usp48Q3V0C5 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC16.32■□□□□ 0.2
Usp48Q3V0C5 Gm38158-201ENSMUST00000194617 339 ntBASIC16.32■□□□□ 0.2
Usp48Q3V0C5 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Usp48Q3V0C5 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Usp48Q3V0C5 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp48Q3V0C5 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC16.32■□□□□ 0.2
Usp48Q3V0C5 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Usp48Q3V0C5 CT030182.1-201ENSMUST00000225935 533 ntBASIC16.32■□□□□ 0.2
Usp48Q3V0C5 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp48Q3V0C5 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp48Q3V0C5 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp48Q3V0C5 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
Usp48Q3V0C5 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp48Q3V0C5 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp48Q3V0C5 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp48Q3V0C5 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp48Q3V0C5 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp48Q3V0C5 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp48Q3V0C5 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp48Q3V0C5 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Usp48Q3V0C5 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Usp48Q3V0C5 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp48Q3V0C5 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp48Q3V0C5 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Usp48Q3V0C5 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp48Q3V0C5 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp48Q3V0C5 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp48Q3V0C5 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp48Q3V0C5 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC16.31■□□□□ 0.2
Usp48Q3V0C5 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp48Q3V0C5 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp48Q3V0C5 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp48Q3V0C5 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp48Q3V0C5 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Usp48Q3V0C5 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp48Q3V0C5 Gm13323-201ENSMUST00000120245 1151 ntBASIC16.31■□□□□ 0.2
Usp48Q3V0C5 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms