Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.12□□□□□ -0.47
Nhlrc4Q3UP44 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nhlrc4Q3UP44 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.12□□□□□ -0.47
Nhlrc4Q3UP44 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nhlrc4Q3UP44 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nhlrc4Q3UP44 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nhlrc4Q3UP44 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nhlrc4Q3UP44 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.12□□□□□ -0.47
Nhlrc4Q3UP44 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nhlrc4Q3UP44 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nhlrc4Q3UP44 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Nhlrc4Q3UP44 Gm8805-201ENSMUST00000117848 313 ntBASIC12.12□□□□□ -0.47
Nhlrc4Q3UP44 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.12□□□□□ -0.47
Nhlrc4Q3UP44 Gm13369-201ENSMUST00000119442 987 ntBASIC12.12□□□□□ -0.47
Nhlrc4Q3UP44 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.12□□□□□ -0.47
Nhlrc4Q3UP44 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Nhlrc4Q3UP44 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nhlrc4Q3UP44 Gm27486-201ENSMUST00000184923 80 ntBASIC12.12□□□□□ -0.47
Nhlrc4Q3UP44 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nhlrc4Q3UP44 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nhlrc4Q3UP44 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.12□□□□□ -0.47
Nhlrc4Q3UP44 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.12□□□□□ -0.47
Nhlrc4Q3UP44 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nhlrc4Q3UP44 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nhlrc4Q3UP44 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Nhlrc4Q3UP44 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nhlrc4Q3UP44 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.12□□□□□ -0.47
Nhlrc4Q3UP44 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nhlrc4Q3UP44 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nhlrc4Q3UP44 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nhlrc4Q3UP44 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nhlrc4Q3UP44 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nhlrc4Q3UP44 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nhlrc4Q3UP44 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nhlrc4Q3UP44 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Nhlrc4Q3UP44 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nhlrc4Q3UP44 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nhlrc4Q3UP44 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nhlrc4Q3UP44 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.11□□□□□ -0.47
Nhlrc4Q3UP44 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nhlrc4Q3UP44 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Nhlrc4Q3UP44 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nhlrc4Q3UP44 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nhlrc4Q3UP44 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nhlrc4Q3UP44 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nhlrc4Q3UP44 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Nhlrc4Q3UP44 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nhlrc4Q3UP44 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.11□□□□□ -0.47
Nhlrc4Q3UP44 Gm22331-201ENSMUST00000158066 136 ntBASIC12.11□□□□□ -0.47
Nhlrc4Q3UP44 Gm28693-202ENSMUST00000190758 331 ntBASIC12.11□□□□□ -0.47
Nhlrc4Q3UP44 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Nhlrc4Q3UP44 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nhlrc4Q3UP44 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nhlrc4Q3UP44 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nhlrc4Q3UP44 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Nhlrc4Q3UP44 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nhlrc4Q3UP44 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.11□□□□□ -0.47
Nhlrc4Q3UP44 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nhlrc4Q3UP44 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nhlrc4Q3UP44 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nhlrc4Q3UP44 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.11□□□□□ -0.47
Nhlrc4Q3UP44 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.11□□□□□ -0.47
Nhlrc4Q3UP44 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Nhlrc4Q3UP44 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nhlrc4Q3UP44 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Nhlrc4Q3UP44 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nhlrc4Q3UP44 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nhlrc4Q3UP44 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nhlrc4Q3UP44 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nhlrc4Q3UP44 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nhlrc4Q3UP44 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Nhlrc4Q3UP44 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nhlrc4Q3UP44 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.1□□□□□ -0.47
Nhlrc4Q3UP44 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nhlrc4Q3UP44 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nhlrc4Q3UP44 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Nhlrc4Q3UP44 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nhlrc4Q3UP44 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Nhlrc4Q3UP44 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Nhlrc4Q3UP44 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nhlrc4Q3UP44 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.1□□□□□ -0.47
Nhlrc4Q3UP44 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Nhlrc4Q3UP44 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.1□□□□□ -0.47
Nhlrc4Q3UP44 Gm27331-201ENSMUST00000183705 60 ntBASIC12.1□□□□□ -0.47
Nhlrc4Q3UP44 Gm27847-201ENSMUST00000183711 107 ntBASIC12.1□□□□□ -0.47
Nhlrc4Q3UP44 Gm27375-201ENSMUST00000183799 107 ntBASIC12.1□□□□□ -0.47
Nhlrc4Q3UP44 Gm8602-201ENSMUST00000184045 607 ntBASIC12.1□□□□□ -0.47
Nhlrc4Q3UP44 Gm37922-201ENSMUST00000195596 455 ntBASIC12.1□□□□□ -0.47
Nhlrc4Q3UP44 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nhlrc4Q3UP44 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.1□□□□□ -0.47
Nhlrc4Q3UP44 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
Nhlrc4Q3UP44 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.1□□□□□ -0.47
Nhlrc4Q3UP44 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.1□□□□□ -0.47
Nhlrc4Q3UP44 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.1□□□□□ -0.47
Nhlrc4Q3UP44 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nhlrc4Q3UP44 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nhlrc4Q3UP44 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nhlrc4Q3UP44 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nhlrc4Q3UP44 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nhlrc4Q3UP44 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms