Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.91□□□□□ -0.18
Nlrc4Q3UP24 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.91□□□□□ -0.18
Nlrc4Q3UP24 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nlrc4Q3UP24 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nlrc4Q3UP24 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nlrc4Q3UP24 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nlrc4Q3UP24 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nlrc4Q3UP24 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Nlrc4Q3UP24 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.91□□□□□ -0.18
Nlrc4Q3UP24 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nlrc4Q3UP24 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nlrc4Q3UP24 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nlrc4Q3UP24 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.9□□□□□ -0.18
Nlrc4Q3UP24 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.9□□□□□ -0.18
Nlrc4Q3UP24 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nlrc4Q3UP24 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nlrc4Q3UP24 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nlrc4Q3UP24 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nlrc4Q3UP24 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nlrc4Q3UP24 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nlrc4Q3UP24 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.9□□□□□ -0.18
Nlrc4Q3UP24 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nlrc4Q3UP24 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.9□□□□□ -0.18
Nlrc4Q3UP24 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.9□□□□□ -0.18
Nlrc4Q3UP24 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Nlrc4Q3UP24 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nlrc4Q3UP24 Gm13369-201ENSMUST00000119442 987 ntBASIC13.9□□□□□ -0.18
Nlrc4Q3UP24 Gm13829-201ENSMUST00000119600 138 ntBASIC13.9□□□□□ -0.18
Nlrc4Q3UP24 Gm29649-201ENSMUST00000185649 419 ntBASIC13.9□□□□□ -0.18
Nlrc4Q3UP24 Gm37922-201ENSMUST00000195596 455 ntBASIC13.9□□□□□ -0.18
Nlrc4Q3UP24 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.9□□□□□ -0.18
Nlrc4Q3UP24 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.9□□□□□ -0.18
Nlrc4Q3UP24 Gm29705-201ENSMUST00000212598 474 ntBASIC13.9□□□□□ -0.18
Nlrc4Q3UP24 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nlrc4Q3UP24 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Nlrc4Q3UP24 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.9□□□□□ -0.18
Nlrc4Q3UP24 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nlrc4Q3UP24 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.9□□□□□ -0.18
Nlrc4Q3UP24 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nlrc4Q3UP24 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nlrc4Q3UP24 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nlrc4Q3UP24 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nlrc4Q3UP24 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nlrc4Q3UP24 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nlrc4Q3UP24 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nlrc4Q3UP24 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
Nlrc4Q3UP24 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
Nlrc4Q3UP24 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Nlrc4Q3UP24 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Gm37497-201ENSMUST00000195830 798 ntBASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Nlrc4Q3UP24 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nlrc4Q3UP24 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms