Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Fndc4Q3TR08 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Fndc4Q3TR08 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Fndc4Q3TR08 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Fndc4Q3TR08 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Fndc4Q3TR08 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fndc4Q3TR08 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fndc4Q3TR08 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fndc4Q3TR08 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Fndc4Q3TR08 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fndc4Q3TR08 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
Fndc4Q3TR08 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Fndc4Q3TR08 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Fndc4Q3TR08 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fndc4Q3TR08 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.27□□□□□ -0.61
Fndc4Q3TR08 Gm15393-201ENSMUST00000120499 219 ntBASIC11.27□□□□□ -0.61
Fndc4Q3TR08 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC11.27□□□□□ -0.61
Fndc4Q3TR08 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.27□□□□□ -0.61
Fndc4Q3TR08 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Fndc4Q3TR08 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.27□□□□□ -0.61
Fndc4Q3TR08 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Fndc4Q3TR08 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fndc4Q3TR08 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fndc4Q3TR08 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fndc4Q3TR08 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fndc4Q3TR08 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fndc4Q3TR08 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Fndc4Q3TR08 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fndc4Q3TR08 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Fndc4Q3TR08 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fndc4Q3TR08 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fndc4Q3TR08 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fndc4Q3TR08 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fndc4Q3TR08 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.27□□□□□ -0.61
Fndc4Q3TR08 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.27□□□□□ -0.61
Fndc4Q3TR08 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fndc4Q3TR08 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fndc4Q3TR08 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fndc4Q3TR08 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fndc4Q3TR08 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Fndc4Q3TR08 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fndc4Q3TR08 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fndc4Q3TR08 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Fndc4Q3TR08 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Fndc4Q3TR08 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Fndc4Q3TR08 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Fndc4Q3TR08 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Fndc4Q3TR08 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Gm12585-201ENSMUST00000117307 290 ntBASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Mir7023-201ENSMUST00000185093 64 ntBASIC11.26□□□□□ -0.61
Fndc4Q3TR08 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Gm4971-201ENSMUST00000205991 1108 ntBASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fndc4Q3TR08 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms