Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nhej1Q3KNJ2 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nhej1Q3KNJ2 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nhej1Q3KNJ2 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nhej1Q3KNJ2 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nhej1Q3KNJ2 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nhej1Q3KNJ2 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nhej1Q3KNJ2 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.08□□□□□ -0.16
Nhej1Q3KNJ2 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nhej1Q3KNJ2 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nhej1Q3KNJ2 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nhej1Q3KNJ2 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.08□□□□□ -0.16
Nhej1Q3KNJ2 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nhej1Q3KNJ2 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
Nhej1Q3KNJ2 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.08□□□□□ -0.16
Nhej1Q3KNJ2 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.08□□□□□ -0.16
Nhej1Q3KNJ2 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nhej1Q3KNJ2 Gm43575-201ENSMUST00000196420 516 ntBASIC14.08□□□□□ -0.16
Nhej1Q3KNJ2 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.08□□□□□ -0.16
Nhej1Q3KNJ2 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nhej1Q3KNJ2 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nhej1Q3KNJ2 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nhej1Q3KNJ2 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nhej1Q3KNJ2 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nhej1Q3KNJ2 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nhej1Q3KNJ2 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Nhej1Q3KNJ2 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nhej1Q3KNJ2 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nhej1Q3KNJ2 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nhej1Q3KNJ2 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Nhej1Q3KNJ2 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
Nhej1Q3KNJ2 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nhej1Q3KNJ2 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Nhej1Q3KNJ2 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Nhej1Q3KNJ2 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nhej1Q3KNJ2 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nhej1Q3KNJ2 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nhej1Q3KNJ2 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nhej1Q3KNJ2 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.07□□□□□ -0.16
Nhej1Q3KNJ2 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nhej1Q3KNJ2 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Nhej1Q3KNJ2 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.07□□□□□ -0.16
Nhej1Q3KNJ2 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nhej1Q3KNJ2 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nhej1Q3KNJ2 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Nhej1Q3KNJ2 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nhej1Q3KNJ2 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nhej1Q3KNJ2 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nhej1Q3KNJ2 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.07□□□□□ -0.16
Nhej1Q3KNJ2 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nhej1Q3KNJ2 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nhej1Q3KNJ2 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.07□□□□□ -0.16
Nhej1Q3KNJ2 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nhej1Q3KNJ2 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhej1Q3KNJ2 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhej1Q3KNJ2 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.06□□□□□ -0.16
Nhej1Q3KNJ2 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Nhej1Q3KNJ2 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhej1Q3KNJ2 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.06□□□□□ -0.16
Nhej1Q3KNJ2 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhej1Q3KNJ2 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhej1Q3KNJ2 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nhej1Q3KNJ2 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhej1Q3KNJ2 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhej1Q3KNJ2 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhej1Q3KNJ2 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.06□□□□□ -0.16
Nhej1Q3KNJ2 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.06□□□□□ -0.16
Nhej1Q3KNJ2 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.06□□□□□ -0.16
Nhej1Q3KNJ2 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.06□□□□□ -0.16
Nhej1Q3KNJ2 Gm43094-201ENSMUST00000196549 921 ntBASIC14.06□□□□□ -0.16
Nhej1Q3KNJ2 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhej1Q3KNJ2 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.06□□□□□ -0.16
Nhej1Q3KNJ2 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.06□□□□□ -0.16
Nhej1Q3KNJ2 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhej1Q3KNJ2 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhej1Q3KNJ2 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Nhej1Q3KNJ2 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.06□□□□□ -0.16
Nhej1Q3KNJ2 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhej1Q3KNJ2 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhej1Q3KNJ2 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.06□□□□□ -0.16
Nhej1Q3KNJ2 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhej1Q3KNJ2 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Nhej1Q3KNJ2 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhej1Q3KNJ2 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Nhej1Q3KNJ2 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Nhej1Q3KNJ2 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Nhej1Q3KNJ2 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.05□□□□□ -0.16
Nhej1Q3KNJ2 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Nhej1Q3KNJ2 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nhej1Q3KNJ2 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Nhej1Q3KNJ2 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Nhej1Q3KNJ2 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
Nhej1Q3KNJ2 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nhej1Q3KNJ2 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.05□□□□□ -0.16
Nhej1Q3KNJ2 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nhej1Q3KNJ2 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nhej1Q3KNJ2 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nhej1Q3KNJ2 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nhej1Q3KNJ2 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nhej1Q3KNJ2 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms