Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
H3f3aP84244 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
H3f3aP84244 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H3f3aP84244 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.76□□□□□ -0.53
H3f3aP84244 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.76□□□□□ -0.53
H3f3aP84244 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
H3f3aP84244 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
H3f3aP84244 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
H3f3aP84244 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H3f3aP84244 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
H3f3aP84244 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H3f3aP84244 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.76□□□□□ -0.53
H3f3aP84244 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
H3f3aP84244 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H3f3aP84244 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H3f3aP84244 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.76□□□□□ -0.53
H3f3aP84244 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.76□□□□□ -0.53
H3f3aP84244 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H3f3aP84244 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H3f3aP84244 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
H3f3aP84244 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
H3f3aP84244 Gm8213-201ENSMUST00000118191 441 ntBASIC11.76□□□□□ -0.53
H3f3aP84244 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H3f3aP84244 Proscos-202ENSMUST00000178990 666 ntBASIC11.76□□□□□ -0.53
H3f3aP84244 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.76□□□□□ -0.53
H3f3aP84244 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.76□□□□□ -0.53
H3f3aP84244 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.76□□□□□ -0.53
H3f3aP84244 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
H3f3aP84244 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
H3f3aP84244 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.76□□□□□ -0.53
H3f3aP84244 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H3f3aP84244 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H3f3aP84244 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.76□□□□□ -0.53
H3f3aP84244 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
H3f3aP84244 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
H3f3aP84244 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
H3f3aP84244 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H3f3aP84244 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
H3f3aP84244 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
H3f3aP84244 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.76□□□□□ -0.53
H3f3aP84244 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
H3f3aP84244 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
H3f3aP84244 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.76□□□□□ -0.53
H3f3aP84244 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H3f3aP84244 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.76□□□□□ -0.53
H3f3aP84244 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
H3f3aP84244 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H3f3aP84244 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.75□□□□□ -0.53
H3f3aP84244 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
H3f3aP84244 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H3f3aP84244 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
H3f3aP84244 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H3f3aP84244 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.75□□□□□ -0.53
H3f3aP84244 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H3f3aP84244 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
H3f3aP84244 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H3f3aP84244 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
H3f3aP84244 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
H3f3aP84244 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
H3f3aP84244 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.75□□□□□ -0.53
H3f3aP84244 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.75□□□□□ -0.53
H3f3aP84244 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
H3f3aP84244 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.75□□□□□ -0.53
H3f3aP84244 Gm24196-201ENSMUST00000179161 110 ntBASIC11.75□□□□□ -0.53
H3f3aP84244 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
H3f3aP84244 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.75□□□□□ -0.53
H3f3aP84244 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.75□□□□□ -0.53
H3f3aP84244 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.75□□□□□ -0.53
H3f3aP84244 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.75□□□□□ -0.53
H3f3aP84244 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.75□□□□□ -0.53
H3f3aP84244 Gm44069-201ENSMUST00000204898 506 ntBASIC11.75□□□□□ -0.53
H3f3aP84244 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.75□□□□□ -0.53
H3f3aP84244 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
H3f3aP84244 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
H3f3aP84244 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
H3f3aP84244 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.75□□□□□ -0.53
H3f3aP84244 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
H3f3aP84244 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
H3f3aP84244 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.75□□□□□ -0.53
H3f3aP84244 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.75□□□□□ -0.53
H3f3aP84244 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
H3f3aP84244 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
H3f3aP84244 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H3f3aP84244 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H3f3aP84244 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H3f3aP84244 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H3f3aP84244 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
H3f3aP84244 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
H3f3aP84244 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3aP84244 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3aP84244 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3aP84244 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3aP84244 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.74□□□□□ -0.53
H3f3aP84244 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3aP84244 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3aP84244 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3aP84244 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3aP84244 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3aP84244 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
H3f3aP84244 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms