Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcaP82350 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
SgcaP82350 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcaP82350 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
SgcaP82350 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
SgcaP82350 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcaP82350 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC11.06□□□□□ -0.64
SgcaP82350 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcaP82350 Gm2810-201ENSMUST00000118681 990 ntBASIC11.06□□□□□ -0.64
SgcaP82350 Gm6539-201ENSMUST00000119157 1064 ntBASIC11.06□□□□□ -0.64
SgcaP82350 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC11.06□□□□□ -0.64
SgcaP82350 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.06□□□□□ -0.64
SgcaP82350 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC11.06□□□□□ -0.64
SgcaP82350 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC11.06□□□□□ -0.64
SgcaP82350 Gm45453-201ENSMUST00000211758 853 ntBASIC11.06□□□□□ -0.64
SgcaP82350 Gm5364-201ENSMUST00000216789 889 ntBASIC11.06□□□□□ -0.64
SgcaP82350 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.06□□□□□ -0.64
SgcaP82350 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcaP82350 Gpr146-202ENSMUST00000053120 1040 ntBASIC11.06□□□□□ -0.64
SgcaP82350 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SgcaP82350 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcaP82350 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcaP82350 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SgcaP82350 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcaP82350 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcaP82350 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcaP82350 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcaP82350 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SgcaP82350 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcaP82350 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC11.06□□□□□ -0.64
SgcaP82350 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcaP82350 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcaP82350 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcaP82350 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcaP82350 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.06□□□□□ -0.64
SgcaP82350 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
SgcaP82350 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcaP82350 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
SgcaP82350 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SgcaP82350 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.05□□□□□ -0.64
SgcaP82350 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcaP82350 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcaP82350 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SgcaP82350 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.05□□□□□ -0.64
SgcaP82350 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcaP82350 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcaP82350 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcaP82350 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcaP82350 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.05□□□□□ -0.64
SgcaP82350 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
SgcaP82350 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcaP82350 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
SgcaP82350 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcaP82350 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
SgcaP82350 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcaP82350 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcaP82350 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SgcaP82350 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SgcaP82350 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.05□□□□□ -0.64
SgcaP82350 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.05□□□□□ -0.64
SgcaP82350 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
SgcaP82350 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcaP82350 Gm20553-201ENSMUST00000204205 844 ntBASIC11.05□□□□□ -0.64
SgcaP82350 Gm44945-201ENSMUST00000206764 1187 ntBASIC11.05□□□□□ -0.64
SgcaP82350 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.05□□□□□ -0.64
SgcaP82350 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.05□□□□□ -0.64
SgcaP82350 AC174742.1-201ENSMUST00000218272 304 ntBASIC11.05□□□□□ -0.64
SgcaP82350 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcaP82350 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC11.05□□□□□ -0.64
SgcaP82350 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC11.05□□□□□ -0.64
SgcaP82350 Psmb5-202ENSMUST00000227257 622 ntBASIC11.05□□□□□ -0.64
SgcaP82350 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcaP82350 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcaP82350 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcaP82350 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
SgcaP82350 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcaP82350 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcaP82350 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcaP82350 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SgcaP82350 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.05□□□□□ -0.64
SgcaP82350 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcaP82350 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcaP82350 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.05□□□□□ -0.64
SgcaP82350 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcaP82350 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
SgcaP82350 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcaP82350 Gm45667-201ENSMUST00000210380 1316 ntBASIC11.05□□□□□ -0.64
SgcaP82350 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
SgcaP82350 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcaP82350 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcaP82350 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcaP82350 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcaP82350 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcaP82350 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
SgcaP82350 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SgcaP82350 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.05□□□□□ -0.64
SgcaP82350 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcaP82350 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
SgcaP82350 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
SgcaP82350 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms