Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Pdlim4P70271 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.02□□□□□ -0.65
Pdlim4P70271 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pdlim4P70271 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pdlim4P70271 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Pdlim4P70271 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pdlim4P70271 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pdlim4P70271 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pdlim4P70271 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pdlim4P70271 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Pdlim4P70271 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pdlim4P70271 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pdlim4P70271 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
Pdlim4P70271 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Pdlim4P70271 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pdlim4P70271 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pdlim4P70271 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Pdlim4P70271 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.02□□□□□ -0.65
Pdlim4P70271 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pdlim4P70271 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pdlim4P70271 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pdlim4P70271 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.01□□□□□ -0.65
Pdlim4P70271 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Pdlim4P70271 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pdlim4P70271 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pdlim4P70271 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pdlim4P70271 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pdlim4P70271 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.01□□□□□ -0.65
Pdlim4P70271 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pdlim4P70271 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Pdlim4P70271 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pdlim4P70271 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pdlim4P70271 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pdlim4P70271 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pdlim4P70271 Gm13689-201ENSMUST00000119360 685 ntBASIC11.01□□□□□ -0.65
Pdlim4P70271 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.01□□□□□ -0.65
Pdlim4P70271 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pdlim4P70271 Gm28911-201ENSMUST00000188837 117 ntBASIC11.01□□□□□ -0.65
Pdlim4P70271 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pdlim4P70271 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.01□□□□□ -0.65
Pdlim4P70271 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.01□□□□□ -0.65
Pdlim4P70271 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Pdlim4P70271 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pdlim4P70271 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.01□□□□□ -0.65
Pdlim4P70271 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pdlim4P70271 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pdlim4P70271 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Pdlim4P70271 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Pdlim4P70271 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.01□□□□□ -0.65
Pdlim4P70271 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Pdlim4P70271 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pdlim4P70271 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pdlim4P70271 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pdlim4P70271 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.01□□□□□ -0.65
Pdlim4P70271 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pdlim4P70271 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pdlim4P70271 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pdlim4P70271 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pdlim4P70271 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pdlim4P70271 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pdlim4P70271 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pdlim4P70271 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Pdlim4P70271 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pdlim4P70271 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pdlim4P70271 Gm13730-201ENSMUST00000121036 1462 ntBASIC11□□□□□ -0.65
Pdlim4P70271 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pdlim4P70271 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pdlim4P70271 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Pdlim4P70271 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pdlim4P70271 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pdlim4P70271 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pdlim4P70271 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pdlim4P70271 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11□□□□□ -0.65
Pdlim4P70271 Gm42480-201ENSMUST00000198434 2595 ntBASIC11□□□□□ -0.65
Pdlim4P70271 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Pdlim4P70271 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Pdlim4P70271 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pdlim4P70271 Gm42706-201ENSMUST00000199733 1910 ntBASIC11□□□□□ -0.65
Pdlim4P70271 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Pdlim4P70271 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Pdlim4P70271 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Pdlim4P70271 Mir692-1-201ENSMUST00000102263 109 ntBASIC11□□□□□ -0.65
Pdlim4P70271 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11□□□□□ -0.65
Pdlim4P70271 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
Pdlim4P70271 Gm12537-201ENSMUST00000119266 1002 ntBASIC11□□□□□ -0.65
Pdlim4P70271 Gm12070-201ENSMUST00000119551 1002 ntBASIC11□□□□□ -0.65
Pdlim4P70271 Gm12671-201ENSMUST00000119978 1002 ntBASIC11□□□□□ -0.65
Pdlim4P70271 Gm13292-201ENSMUST00000120014 1000 ntBASIC11□□□□□ -0.65
Pdlim4P70271 Gm12490-201ENSMUST00000120255 560 ntBASIC11□□□□□ -0.65
Pdlim4P70271 Gm12403-201ENSMUST00000121384 959 ntBASIC11□□□□□ -0.65
Pdlim4P70271 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11□□□□□ -0.65
Pdlim4P70271 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11□□□□□ -0.65
Pdlim4P70271 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11□□□□□ -0.65
Pdlim4P70271 Gm10359-201ENSMUST00000180167 1002 ntBASIC11□□□□□ -0.65
Pdlim4P70271 Gm12033-201ENSMUST00000180654 1002 ntBASIC11□□□□□ -0.65
Pdlim4P70271 Gm5559-201ENSMUST00000180755 1002 ntBASIC11□□□□□ -0.65
Pdlim4P70271 Gm4335-201ENSMUST00000182581 1004 ntBASIC11□□□□□ -0.65
Pdlim4P70271 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pdlim4P70271 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11□□□□□ -0.65
Pdlim4P70271 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms