Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.56□□□□□ -0.08
Hmgb1P63158 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Hmgb1P63158 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb1P63158 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb1P63158 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb1P63158 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb1P63158 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
Hmgb1P63158 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb1P63158 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Hmgb1P63158 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb1P63158 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb1P63158 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb1P63158 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.56□□□□□ -0.08
Hmgb1P63158 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb1P63158 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.56□□□□□ -0.08
Hmgb1P63158 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb1P63158 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb1P63158 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb1P63158 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Hmgb1P63158 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb1P63158 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb1P63158 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb1P63158 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.56□□□□□ -0.08
Hmgb1P63158 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb1P63158 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb1P63158 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb1P63158 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hmgb1P63158 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hmgb1P63158 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hmgb1P63158 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hmgb1P63158 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Hmgb1P63158 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Hmgb1P63158 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Hmgb1P63158 Gm15321-201ENSMUST00000121290 288 ntBASIC14.55□□□□□ -0.08
Hmgb1P63158 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.55□□□□□ -0.08
Hmgb1P63158 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.55□□□□□ -0.08
Hmgb1P63158 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Hmgb1P63158 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.55□□□□□ -0.08
Hmgb1P63158 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Hmgb1P63158 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.55□□□□□ -0.08
Hmgb1P63158 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.55□□□□□ -0.08
Hmgb1P63158 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Hmgb1P63158 Gm5354-201ENSMUST00000182417 973 ntBASIC14.55□□□□□ -0.08
Hmgb1P63158 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.55□□□□□ -0.08
Hmgb1P63158 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hmgb1P63158 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.55□□□□□ -0.08
Hmgb1P63158 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hmgb1P63158 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Hmgb1P63158 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Hmgb1P63158 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Hmgb1P63158 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.55□□□□□ -0.08
Hmgb1P63158 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.55□□□□□ -0.08
Hmgb1P63158 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Hmgb1P63158 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hmgb1P63158 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Hmgb1P63158 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.55□□□□□ -0.08
Hmgb1P63158 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Hmgb1P63158 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Hmgb1P63158 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hmgb1P63158 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Hmgb1P63158 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb1P63158 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Hmgb1P63158 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb1P63158 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb1P63158 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb1P63158 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb1P63158 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Hmgb1P63158 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb1P63158 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Hmgb1P63158 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb1P63158 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb1P63158 Gm45501-201ENSMUST00000211468 2526 ntBASIC14.54□□□□□ -0.08
Hmgb1P63158 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb1P63158 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb1P63158 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb1P63158 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Hmgb1P63158 Gm22189-201ENSMUST00000103822 86 ntBASIC14.54□□□□□ -0.08
Hmgb1P63158 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb1P63158 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.54□□□□□ -0.08
Hmgb1P63158 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Hmgb1P63158 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.54□□□□□ -0.08
Hmgb1P63158 Mir7023-201ENSMUST00000185093 64 ntBASIC14.54□□□□□ -0.08
Hmgb1P63158 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.54□□□□□ -0.08
Hmgb1P63158 Gm42550-201ENSMUST00000201553 960 ntBASIC14.54□□□□□ -0.08
Hmgb1P63158 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.54□□□□□ -0.08
Hmgb1P63158 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb1P63158 Syt7-204ENSMUST00000223586 1344 ntBASIC14.54□□□□□ -0.08
Hmgb1P63158 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb1P63158 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb1P63158 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb1P63158 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb1P63158 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb1P63158 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC14.54□□□□□ -0.08
Hmgb1P63158 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb1P63158 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb1P63158 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb1P63158 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb1P63158 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb1P63158 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.54□□□□□ -0.08
Hmgb1P63158 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms