Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ybx1P62960 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.5□□□□□ -0.25
Ybx1P62960 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.5□□□□□ -0.25
Ybx1P62960 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ybx1P62960 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ybx1P62960 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ybx1P62960 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.5□□□□□ -0.25
Ybx1P62960 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ybx1P62960 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ybx1P62960 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ybx1P62960 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Ybx1P62960 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ybx1P62960 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ybx1P62960 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.5□□□□□ -0.25
Ybx1P62960 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ybx1P62960 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ybx1P62960 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ybx1P62960 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.5□□□□□ -0.25
Ybx1P62960 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.5□□□□□ -0.25
Ybx1P62960 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ybx1P62960 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ybx1P62960 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ybx1P62960 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ybx1P62960 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Ybx1P62960 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Ybx1P62960 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ybx1P62960 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ybx1P62960 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ybx1P62960 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ybx1P62960 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ybx1P62960 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ybx1P62960 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.5□□□□□ -0.25
Ybx1P62960 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ybx1P62960 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ybx1P62960 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ybx1P62960 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ybx1P62960 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ybx1P62960 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Ybx1P62960 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ybx1P62960 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ybx1P62960 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Ybx1P62960 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ybx1P62960 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ybx1P62960 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ybx1P62960 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ybx1P62960 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ybx1P62960 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.49□□□□□ -0.25
Ybx1P62960 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ybx1P62960 Rn7s1-201ENSMUST00000174924 300 ntBASIC13.49□□□□□ -0.25
Ybx1P62960 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.49□□□□□ -0.25
Ybx1P62960 Gm26461-201ENSMUST00000175064 290 ntBASIC13.49□□□□□ -0.25
Ybx1P62960 Gm4768-201ENSMUST00000206199 686 ntBASIC13.49□□□□□ -0.25
Ybx1P62960 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.49□□□□□ -0.25
Ybx1P62960 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ybx1P62960 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ybx1P62960 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.49□□□□□ -0.25
Ybx1P62960 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ybx1P62960 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ybx1P62960 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Ybx1P62960 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ybx1P62960 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ybx1P62960 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ybx1P62960 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ybx1P62960 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ybx1P62960 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ybx1P62960 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ybx1P62960 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ybx1P62960 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ybx1P62960 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ybx1P62960 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ybx1P62960 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ybx1P62960 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ybx1P62960 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ybx1P62960 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ybx1P62960 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ybx1P62960 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ybx1P62960 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ybx1P62960 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ybx1P62960 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ybx1P62960 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ybx1P62960 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Ybx1P62960 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ybx1P62960 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ybx1P62960 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.48□□□□□ -0.25
Ybx1P62960 Gm7993-201ENSMUST00000200970 1384 ntBASIC13.48□□□□□ -0.25
Ybx1P62960 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ybx1P62960 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Ybx1P62960 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.48□□□□□ -0.25
Ybx1P62960 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ybx1P62960 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.48□□□□□ -0.25
Ybx1P62960 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ybx1P62960 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC13.48□□□□□ -0.25
Ybx1P62960 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ybx1P62960 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.48□□□□□ -0.25
Ybx1P62960 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ybx1P62960 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.48□□□□□ -0.25
Ybx1P62960 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC13.48□□□□□ -0.25
Ybx1P62960 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Ybx1P62960 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ybx1P62960 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms