Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.73□□□□□ -0.53
Sf3b6P59708 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3b6P59708 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.73□□□□□ -0.53
Sf3b6P59708 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3b6P59708 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3b6P59708 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.73□□□□□ -0.53
Sf3b6P59708 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3b6P59708 Gm4804-201ENSMUST00000182234 999 ntBASIC11.73□□□□□ -0.53
Sf3b6P59708 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.73□□□□□ -0.53
Sf3b6P59708 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3b6P59708 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3b6P59708 Gm10766-202ENSMUST00000194123 606 ntBASIC11.73□□□□□ -0.53
Sf3b6P59708 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3b6P59708 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.73□□□□□ -0.53
Sf3b6P59708 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.73□□□□□ -0.53
Sf3b6P59708 AC154767.3-201ENSMUST00000225150 1342 ntBASIC11.73□□□□□ -0.53
Sf3b6P59708 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3b6P59708 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3b6P59708 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3b6P59708 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3b6P59708 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3b6P59708 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3b6P59708 Gm25007-201ENSMUST00000083808 133 ntBASIC11.73□□□□□ -0.53
Sf3b6P59708 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3b6P59708 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3b6P59708 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Sf3b6P59708 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3b6P59708 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3b6P59708 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3b6P59708 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3b6P59708 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3b6P59708 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3b6P59708 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Sf3b6P59708 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Sf3b6P59708 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3b6P59708 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3b6P59708 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3b6P59708 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sf3b6P59708 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3b6P59708 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3b6P59708 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3b6P59708 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Sf3b6P59708 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3b6P59708 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3b6P59708 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Sf3b6P59708 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Sf3b6P59708 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3b6P59708 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3b6P59708 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3b6P59708 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3b6P59708 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Sf3b6P59708 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.72□□□□□ -0.53
Sf3b6P59708 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3b6P59708 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3b6P59708 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.72□□□□□ -0.53
Sf3b6P59708 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3b6P59708 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3b6P59708 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3b6P59708 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3b6P59708 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.72□□□□□ -0.53
Sf3b6P59708 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC11.72□□□□□ -0.53
Sf3b6P59708 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Sf3b6P59708 Gm25144-201ENSMUST00000179561 110 ntBASIC11.72□□□□□ -0.53
Sf3b6P59708 Gm25352-201ENSMUST00000179815 110 ntBASIC11.72□□□□□ -0.53
Sf3b6P59708 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Sf3b6P59708 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Sf3b6P59708 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Sf3b6P59708 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3b6P59708 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3b6P59708 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3b6P59708 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.72□□□□□ -0.53
Sf3b6P59708 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Sf3b6P59708 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3b6P59708 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.72□□□□□ -0.53
Sf3b6P59708 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Sf3b6P59708 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3b6P59708 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3b6P59708 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3b6P59708 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.71□□□□□ -0.53
Sf3b6P59708 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3b6P59708 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3b6P59708 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.71□□□□□ -0.53
Sf3b6P59708 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3b6P59708 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Sf3b6P59708 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3b6P59708 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3b6P59708 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3b6P59708 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3b6P59708 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3b6P59708 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.71□□□□□ -0.53
Sf3b6P59708 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.71□□□□□ -0.53
Sf3b6P59708 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3b6P59708 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3b6P59708 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3b6P59708 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Sf3b6P59708 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3b6P59708 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC11.71□□□□□ -0.53
Sf3b6P59708 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3b6P59708 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3b6P59708 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms