Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pdx1P52946 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdx1P52946 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdx1P52946 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdx1P52946 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdx1P52946 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.05□□□□□ -0.32
Pdx1P52946 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.05□□□□□ -0.32
Pdx1P52946 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdx1P52946 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdx1P52946 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pdx1P52946 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdx1P52946 Mir874-201ENSMUST00000104769 76 ntBASIC13.05□□□□□ -0.32
Pdx1P52946 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pdx1P52946 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pdx1P52946 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.05□□□□□ -0.32
Pdx1P52946 Mir1894-201ENSMUST00000122802 81 ntBASIC13.05□□□□□ -0.32
Pdx1P52946 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.05□□□□□ -0.32
Pdx1P52946 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.05□□□□□ -0.32
Pdx1P52946 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdx1P52946 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.05□□□□□ -0.32
Pdx1P52946 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pdx1P52946 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.05□□□□□ -0.32
Pdx1P52946 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdx1P52946 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdx1P52946 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Pdx1P52946 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pdx1P52946 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Pdx1P52946 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Pdx1P52946 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pdx1P52946 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Pdx1P52946 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pdx1P52946 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdx1P52946 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Pdx1P52946 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdx1P52946 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdx1P52946 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdx1P52946 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Pdx1P52946 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.04□□□□□ -0.32
Pdx1P52946 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdx1P52946 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdx1P52946 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.04□□□□□ -0.32
Pdx1P52946 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdx1P52946 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Pdx1P52946 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.04□□□□□ -0.32
Pdx1P52946 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdx1P52946 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pdx1P52946 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Pdx1P52946 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdx1P52946 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdx1P52946 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Pdx1P52946 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Pdx1P52946 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pdx1P52946 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdx1P52946 Gm11478-201ENSMUST00000117851 599 ntBASIC13.04□□□□□ -0.32
Pdx1P52946 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pdx1P52946 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pdx1P52946 Gm8652-201ENSMUST00000181363 964 ntBASIC13.04□□□□□ -0.32
Pdx1P52946 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pdx1P52946 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Pdx1P52946 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.04□□□□□ -0.32
Pdx1P52946 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pdx1P52946 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Pdx1P52946 Gm5186-201ENSMUST00000218781 920 ntBASIC13.04□□□□□ -0.32
Pdx1P52946 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdx1P52946 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdx1P52946 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Pdx1P52946 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Pdx1P52946 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Pdx1P52946 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdx1P52946 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdx1P52946 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdx1P52946 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdx1P52946 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdx1P52946 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdx1P52946 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pdx1P52946 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdx1P52946 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdx1P52946 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdx1P52946 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdx1P52946 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdx1P52946 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdx1P52946 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.04□□□□□ -0.32
Pdx1P52946 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdx1P52946 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pdx1P52946 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pdx1P52946 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pdx1P52946 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdx1P52946 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdx1P52946 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Pdx1P52946 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pdx1P52946 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Pdx1P52946 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.03□□□□□ -0.32
Pdx1P52946 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdx1P52946 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdx1P52946 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdx1P52946 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.03□□□□□ -0.32
Pdx1P52946 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdx1P52946 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.03□□□□□ -0.32
Pdx1P52946 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdx1P52946 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms