Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shmt1P50431 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Shmt1P50431 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.95□□□□□ -0.18
Shmt1P50431 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.95□□□□□ -0.18
Shmt1P50431 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shmt1P50431 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.95□□□□□ -0.18
Shmt1P50431 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shmt1P50431 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shmt1P50431 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Shmt1P50431 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shmt1P50431 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.95□□□□□ -0.18
Shmt1P50431 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Shmt1P50431 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Shmt1P50431 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Shmt1P50431 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shmt1P50431 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shmt1P50431 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shmt1P50431 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shmt1P50431 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shmt1P50431 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Shmt1P50431 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shmt1P50431 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Shmt1P50431 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shmt1P50431 Gm23931-201ENSMUST00000103842 109 ntBASIC13.94□□□□□ -0.18
Shmt1P50431 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shmt1P50431 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.94□□□□□ -0.18
Shmt1P50431 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Shmt1P50431 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Shmt1P50431 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shmt1P50431 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.94□□□□□ -0.18
Shmt1P50431 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.94□□□□□ -0.18
Shmt1P50431 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.94□□□□□ -0.18
Shmt1P50431 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shmt1P50431 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Shmt1P50431 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shmt1P50431 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Shmt1P50431 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Shmt1P50431 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.94□□□□□ -0.18
Shmt1P50431 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shmt1P50431 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Shmt1P50431 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Shmt1P50431 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Shmt1P50431 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Shmt1P50431 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shmt1P50431 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shmt1P50431 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shmt1P50431 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Shmt1P50431 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shmt1P50431 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shmt1P50431 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Shmt1P50431 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Shmt1P50431 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shmt1P50431 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shmt1P50431 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shmt1P50431 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shmt1P50431 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shmt1P50431 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shmt1P50431 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shmt1P50431 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shmt1P50431 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shmt1P50431 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shmt1P50431 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shmt1P50431 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shmt1P50431 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Shmt1P50431 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.93□□□□□ -0.18
Shmt1P50431 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Shmt1P50431 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Shmt1P50431 Gm12384-201ENSMUST00000119228 919 ntBASIC13.93□□□□□ -0.18
Shmt1P50431 Gm1335-201ENSMUST00000121653 386 ntBASIC13.93□□□□□ -0.18
Shmt1P50431 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.93□□□□□ -0.18
Shmt1P50431 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.93□□□□□ -0.18
Shmt1P50431 Gm17420-201ENSMUST00000164753 153 ntBASIC13.93□□□□□ -0.18
Shmt1P50431 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.93□□□□□ -0.18
Shmt1P50431 Gm28693-202ENSMUST00000190758 331 ntBASIC13.93□□□□□ -0.18
Shmt1P50431 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.93□□□□□ -0.18
Shmt1P50431 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Shmt1P50431 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shmt1P50431 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shmt1P50431 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shmt1P50431 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shmt1P50431 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Shmt1P50431 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.93□□□□□ -0.18
Shmt1P50431 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.93□□□□□ -0.18
Shmt1P50431 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shmt1P50431 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Shmt1P50431 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shmt1P50431 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shmt1P50431 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Shmt1P50431 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
Shmt1P50431 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Shmt1P50431 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Shmt1P50431 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shmt1P50431 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shmt1P50431 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shmt1P50431 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Shmt1P50431 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shmt1P50431 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Shmt1P50431 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Shmt1P50431 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Shmt1P50431 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms