Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ercc3P49135 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Ercc3P49135 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ercc3P49135 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ercc3P49135 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ercc3P49135 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ercc3P49135 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC15.68■□□□□ 0.1
Ercc3P49135 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Ercc3P49135 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ercc3P49135 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ercc3P49135 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ercc3P49135 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ercc3P49135 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ercc3P49135 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC15.67■□□□□ 0.1
Ercc3P49135 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ercc3P49135 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ercc3P49135 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Ercc3P49135 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ercc3P49135 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ercc3P49135 Gm17150-201ENSMUST00000165577 381 ntBASIC15.67■□□□□ 0.1
Ercc3P49135 Gm9124-201ENSMUST00000191789 1092 ntBASIC15.67■□□□□ 0.1
Ercc3P49135 Gm9113-201ENSMUST00000192510 1018 ntBASIC15.67■□□□□ 0.1
Ercc3P49135 Gm9131-201ENSMUST00000193557 1089 ntBASIC15.67■□□□□ 0.1
Ercc3P49135 Gm9121-201ENSMUST00000193749 1071 ntBASIC15.67■□□□□ 0.1
Ercc3P49135 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC15.67■□□□□ 0.1
Ercc3P49135 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC15.67■□□□□ 0.1
Ercc3P49135 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ercc3P49135 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ercc3P49135 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ercc3P49135 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ercc3P49135 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ercc3P49135 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ercc3P49135 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ercc3P49135 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ercc3P49135 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ercc3P49135 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ercc3P49135 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ercc3P49135 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ercc3P49135 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ercc3P49135 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ercc3P49135 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ercc3P49135 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Ercc3P49135 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ercc3P49135 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ercc3P49135 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC15.67■□□□□ 0.1
Ercc3P49135 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC15.67■□□□□ 0.1
Ercc3P49135 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ercc3P49135 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ercc3P49135 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC15.66■□□□□ 0.1
Ercc3P49135 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ercc3P49135 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ercc3P49135 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC15.66■□□□□ 0.1
Ercc3P49135 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ercc3P49135 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ercc3P49135 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ercc3P49135 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ercc3P49135 Gm12390-201ENSMUST00000117897 397 ntBASIC15.66■□□□□ 0.1
Ercc3P49135 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC15.66■□□□□ 0.1
Ercc3P49135 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC15.66■□□□□ 0.1
Ercc3P49135 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Ercc3P49135 Gm7561-201ENSMUST00000211203 886 ntBASIC15.66■□□□□ 0.1
Ercc3P49135 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ercc3P49135 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ercc3P49135 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ercc3P49135 Gm10012-201ENSMUST00000078252 192 ntBASIC15.66■□□□□ 0.1
Ercc3P49135 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ercc3P49135 Gm38346-201ENSMUST00000192379 2639 ntBASIC15.66■□□□□ 0.1
Ercc3P49135 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ercc3P49135 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ercc3P49135 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ercc3P49135 Gm13050-201ENSMUST00000122149 1345 ntBASIC15.66■□□□□ 0.1
Ercc3P49135 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ercc3P49135 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ercc3P49135 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ercc3P49135 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC15.66■□□□□ 0.1
Ercc3P49135 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ercc3P49135 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ercc3P49135 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Ercc3P49135 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ercc3P49135 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ercc3P49135 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC15.65■□□□□ 0.1
Ercc3P49135 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Ercc3P49135 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ercc3P49135 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ercc3P49135 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC15.65■□□□□ 0.1
Ercc3P49135 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Ercc3P49135 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ercc3P49135 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC15.65■□□□□ 0.1
Ercc3P49135 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC15.65■□□□□ 0.1
Ercc3P49135 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC15.65■□□□□ 0.1
Ercc3P49135 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ercc3P49135 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ercc3P49135 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ercc3P49135 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC15.65■□□□□ 0.1
Ercc3P49135 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ercc3P49135 Gm6266-201ENSMUST00000203844 806 ntBASIC15.65■□□□□ 0.1
Ercc3P49135 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ercc3P49135 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ercc3P49135 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Ercc3P49135 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms