Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm6506-201ENSMUST00000119775 1136 ntBASIC14.52□□□□□ -0.08
Brca1P48754 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Brca1P48754 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC14.52□□□□□ -0.08
Brca1P48754 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC14.52□□□□□ -0.08
Brca1P48754 Gm37905-201ENSMUST00000195310 341 ntBASIC14.52□□□□□ -0.08
Brca1P48754 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC14.52□□□□□ -0.08
Brca1P48754 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Brca1P48754 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Brca1P48754 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Brca1P48754 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Brca1P48754 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Brca1P48754 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Brca1P48754 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Brca1P48754 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Brca1P48754 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Brca1P48754 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Brca1P48754 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Brca1P48754 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Brca1P48754 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Brca1P48754 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Brca1P48754 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Brca1P48754 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Brca1P48754 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Brca1P48754 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Brca1P48754 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Brca1P48754 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Brca1P48754 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC14.52□□□□□ -0.09
Brca1P48754 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Brca1P48754 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Brca1P48754 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Brca1P48754 Gm11450-201ENSMUST00000121144 333 ntBASIC14.52□□□□□ -0.09
Brca1P48754 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC14.52□□□□□ -0.09
Brca1P48754 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Brca1P48754 Gm38210-201ENSMUST00000191944 809 ntBASIC14.52□□□□□ -0.09
Brca1P48754 Gm19187-201ENSMUST00000206781 892 ntBASIC14.52□□□□□ -0.09
Brca1P48754 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Brca1P48754 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC14.52□□□□□ -0.09
Brca1P48754 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Brca1P48754 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.52□□□□□ -0.09
Brca1P48754 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Brca1P48754 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Brca1P48754 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.52□□□□□ -0.09
Brca1P48754 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Brca1P48754 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Brca1P48754 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Brca1P48754 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.51□□□□□ -0.09
Brca1P48754 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Brca1P48754 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Brca1P48754 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Brca1P48754 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Brca1P48754 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Brca1P48754 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Brca1P48754 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Brca1P48754 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Brca1P48754 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Brca1P48754 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Brca1P48754 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC14.51□□□□□ -0.09
Brca1P48754 Gm15432-201ENSMUST00000121106 195 ntBASIC14.51□□□□□ -0.09
Brca1P48754 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.51□□□□□ -0.09
Brca1P48754 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC14.51□□□□□ -0.09
Brca1P48754 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC14.51□□□□□ -0.09
Brca1P48754 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC14.51□□□□□ -0.09
Brca1P48754 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC14.51□□□□□ -0.09
Brca1P48754 AC159205.5-202ENSMUST00000224849 386 ntBASIC14.51□□□□□ -0.09
Brca1P48754 AC099645.1-201ENSMUST00000226476 1105 ntBASIC14.51□□□□□ -0.09
Brca1P48754 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Brca1P48754 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Brca1P48754 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Brca1P48754 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Brca1P48754 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Brca1P48754 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Brca1P48754 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Brca1P48754 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Brca1P48754 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Brca1P48754 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Brca1P48754 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Brca1P48754 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Brca1P48754 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Brca1P48754 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Brca1P48754 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Brca1P48754 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Brca1P48754 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Brca1P48754 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Brca1P48754 Gm11941-201ENSMUST00000119904 610 ntBASIC14.5□□□□□ -0.09
Brca1P48754 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC14.5□□□□□ -0.09
Brca1P48754 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Brca1P48754 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Brca1P48754 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Brca1P48754 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Brca1P48754 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Brca1P48754 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Brca1P48754 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Brca1P48754 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Brca1P48754 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Brca1P48754 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Brca1P48754 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Brca1P48754 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.5□□□□□ -0.09
Brca1P48754 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.5□□□□□ -0.09
Brca1P48754 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Brca1P48754 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms